RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LIMK1P53667 647 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 FRA10AC1Q70Z53 315 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 KIAA2013Q8IYS2 634 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 TMEM151AQ8N4L1 468 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 OR6C4Q8NGE1 309 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 JPH3Q8WXH2 748 aaPredicted RBP23.47■■□□□ 1.35
PVT1-212ENST00000521951 CNDP2Q96KP4 475 aaKnown RBP23.47■■□□□ 1.35
PVT1-212ENST00000521951 UCK1Q9HA47 277 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 XPR1Q9UBH6 696 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 ASXL3Q9C0F0 2248 aa23.47■■□□□ 1.35
PVT1-212ENST00000521951 CPED1A4D0V7 1026 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 EME2A4GXA9 379 aaPredicted RBP23.46■■□□□ 1.35
PVT1-212ENST00000521951 CBFA2T3O75081 653 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 SBK3P0C264 359 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 CKMT1AP12532 417 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 AP1S2P56377 157 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 DAB2P98082 770 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 TGFBIQ15582 683 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 GUSBP11Q6P575 273 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 MBOAT1Q6ZNC8 495 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 ZNF438Q7Z4V0 828 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 EXT2Q93063 718 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 CCDC138Q96M89 665 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 MENTQ9BUN1 341 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.46■■□□□ 1.35
PVT1-212ENST00000521951 MRPL46Q9H2W6 279 aaKnown RBP23.46■■□□□ 1.35
PVT1-212ENST00000521951 ARL15Q9NXU5 204 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 CPSF2Q9P2I0 782 aaKnown RBP23.46■■□□□ 1.35
PVT1-212ENST00000521951 ICKQ9UPZ9 632 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 PLLPQ9Y342 182 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 RP1P56715 2156 aa23.46■■□□□ 1.35
PVT1-212ENST00000521951 PTPRZ1P23471 2315 aaPredicted RBP23.46■■□□□ 1.35
PVT1-212ENST00000521951 PABPN1LA6NDY0 278 aaKnown RBP23.45■■□□□ 1.34
PVT1-212ENST00000521951 TK2O00142 265 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 GUCA1CO95843 209 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 DUSP3P51452 185 aaPredicted RBP23.45■■□□□ 1.34
PVT1-212ENST00000521951 CDKL1Q00532 357 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 PLCL1Q15111 1095 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 BAHD1Q8TBE0 780 aaPredicted RBP23.45■■□□□ 1.34
PVT1-212ENST00000521951 TCP10LQ8TDR4 215 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 DENND1AQ8TEH3 1009 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 LCN9Q8WX39 176 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 IL17FQ96PD4 163 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 SLC38A3Q99624 504 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 TBC1D10AQ9BXI6 508 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 IQCGQ9H095 443 aaKnown RBP23.45■■□□□ 1.34
PVT1-212ENST00000521951 XKR8Q9H6D3 395 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 FTSJ1Q9UET6 329 aa23.45■■□□□ 1.34
PVT1-212ENST00000521951 TARM1B6A8C7 271 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 UBXN8O00124 270 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 KDM1AO60341 852 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 PROCP04070 461 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 MTHFD2P13995 350 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 PIP4P1Q86T03 277 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 OR4E2Q8NGC2 313 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 CCDC74AQ96AQ1 378 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 KCNK9Q9NPC2 374 aa23.44■■□□□ 1.34
PVT1-212ENST00000521951 NCF1BA6NI72 391 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 LILRA5A6NI73 299 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SYCE1LA8MT33 242 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 NCF1CA8MVU1 366 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 HMGB1P1B2RPK0 211 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 SUPT3HB4E1H0 165 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 PLIN3O60664 434 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SUPT3HO75486 399 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SLC16A8O95907 504 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 NCF1P14598 390 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 CKMT2P17540 419 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 RPA3P35244 121 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 NR1D2Q14995 579 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 CCDC153Q494R4 210 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 PERM1Q5SV97 790 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 EFL1Q7Z2Z2 1120 aaKnown RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 LMNTD1Q8N9Z9 388 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 EGFL8Q99944 293 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 EVA1BQ9NVM1 165 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 NUDT4Q9NZJ9 180 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 CD274Q9NZQ7 290 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SPATA7Q9P0W8 599 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SLC17A7Q9P2U7 560 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 LNPEPQ9UIQ6 1025 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 PRPF4O43172 522 aaKnown RBP eCLIP23.43■■□□□ 1.344e-9■■□□□ 13.9
PVT1-212ENST00000521951 ANXA5P08758 320 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 PNLIPP16233 465 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 PKLRP30613 574 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 GPR3P46089 330 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 RAB28P51157 221 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 ZNF480Q8WV37 535 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 NAT6Q93015 286 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 FBXL8Q96CD0 374 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 FAM111AQ96PZ2 611 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 SRMSQ9H3Y6 488 aa23.43■■□□□ 1.34
PVT1-212ENST00000521951 STOX2Q9P2F5 926 aaPredicted RBP23.43■■□□□ 1.34
PVT1-212ENST00000521951 ERGP11308 486 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 IMPA1P29218 277 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 ALDH4A1P30038 563 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 SHMT2P34897 504 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 OR1D5P58170 312 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 MPP2Q14168 576 aa23.42■■□□□ 1.34
PVT1-212ENST00000521951 CYP2A13Q16696 494 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms