RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 LMNTD1Q8N9Z9 388 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 LINC01555Q8NAE3 123 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 SLC38A9Q8NBW4 561 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 OR1L3Q8NH93 324 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 STARD8Q92502 1023 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 MED8Q96G25 268 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 IL17FQ96PD4 163 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 SYTL2Q9HCH5 934 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 FAM60AQ9NP50 221 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 C20orf96Q9NUD7 363 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 INTS10Q9NVR2 710 aaKnown RBP17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 NFS1Q9Y697 457 aa17.28■□□□□ 0.36
TRAPPC9-211ENST00000521700 ISM1B1AKI9 464 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 MAP3K7O43318 606 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 PRKAR1AP10644 381 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 TCN2P20062 427 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 CHRM3P20309 590 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 CD9P21926 228 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 C19orf57Q0VDD7 668 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 GBX1Q14549 363 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 KIR2DS3Q14952 304 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 LONRF1Q17RB8 773 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 ZNF470Q6ECI4 717 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 FAM199XQ6PEV8 388 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 CDHR3Q6ZTQ4 885 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 PCGF5Q86SE9 256 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 HOOK3Q86VS8 718 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 C2orf73Q8N5S3 287 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 CT55Q8WUE5 264 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 ARHGAP9Q9BRR9 750 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 FANCEQ9HB96 536 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 RUVBL2Q9Y230 463 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 VPS9D1Q9Y2B5 631 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 FAM169AQ9Y6X4 670 aa17.27■□□□□ 0.36
TRAPPC9-211ENST00000521700 SNRNP200O75643 2136 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 PIEZO2Q9H5I5 2752 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 A0A0J9YY10 115 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 TMEM150CB9EJG8 249 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 CPNE3O75131 537 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 KATNA1O75449 491 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 C1orf105O95561 183 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 MC1RQ01726 317 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 DHX9Q08211 1270 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 DNASE1L3Q13609 305 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 SLC5A12Q1EHB4 618 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 CCSMST1Q4G0I0 132 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 MSS51Q4VC12 460 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 CRTC2Q53ET0 693 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 C16orf46Q6P387 395 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 TTC23LQ6PF05 361 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 SYDE1Q6ZW31 735 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 C19orf47Q8N9M1 422 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 SKA2Q8WVK7 121 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 TCTN2Q96GX1 697 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 FBXO6Q9NRD1 293 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 SERTAD3Q9UJW9 196 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 KCND3Q9UK17 655 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 PCDHB3Q9Y5E6 796 aa17.26■□□□□ 0.35
TRAPPC9-211ENST00000521700 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 HCRTR1O43613 425 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 BANF1O75531 89 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 FAM87AP0C7U9 286 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 SLC1A2P43004 574 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 PAFAH1B1P43034 410 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 BDKRB1P46663 353 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 GABRA4P48169 554 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 DR1Q01658 176 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 CDC20Q12834 499 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 GPS2Q13227 327 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 HSP90AA5PQ58FG0 334 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 ACSBG2Q5FVE4 666 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 ATP1A1-AS1Q5TC04 95 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 ZNF549Q6P9A3 640 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 BORAQ6PGQ7 559 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 CNSTQ6PJW8 725 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 SPNS2Q8IVW8 549 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 FAM20CQ8IXL6 584 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 ZBTB2Q8N680 514 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 OR2L8Q8NGY9 312 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 RAD51AP1Q96B01 352 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 LRFN5Q96NI6 719 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 RUNDC3BQ96NL0 473 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 CATSPER2Q96P56 530 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 RUFY1Q96T51 708 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 EBNA1BP2Q99848 306 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 CHRNA10Q9GZZ6 450 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 TSR3Q9UJK0 312 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 SLC39A10Q9ULF5 831 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 MED16Q9Y2X0 877 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 PCDHGA6Q9Y5G7 932 aa17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAPPC9-211ENST00000521700 KRT87PA6NCN2 255 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 C21orf140B9A014 251 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 E5RI56 91 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms