RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TFGQ92734 400 aaPredicted RBP14.9□□□□□ -0.02
LSM1-203ENST00000520755 KIAA1191Q96A73 305 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 SH3KBP1Q96B97 665 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 FERD3LQ96RJ6 166 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 SMC6Q96SB8 1091 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ATOH8Q96SQ7 321 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ABCG4Q9H172 646 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ALG9Q9H6U8 611 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
LSM1-203ENST00000520755 SLC17A7Q9P2U7 560 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 XPR1Q9UBH6 696 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ASF1AQ9Y294 204 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 HEBP2Q9Y5Z4 205 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 PTPRBP23467 1997 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 HMGB1P1B2RPK0 211 aaPredicted RBP14.89□□□□□ -0.03
LSM1-203ENST00000520755 TARM1B6A8C7 271 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 PROCP04070 461 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 RPLP0P05388 317 aaKnown RBP14.89□□□□□ -0.03
LSM1-203ENST00000520755 PNLIPP16233 465 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 MAPK9P45984 424 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 SP140Q13342 867 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 GPR18Q14330 331 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 GRB7Q14451 532 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 FAM83EQ2M2I3 478 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 UNC5DQ6UXZ4 953 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 TMEM26Q6ZUK4 368 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 SPRED1Q7Z699 444 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 LCA5Q86VQ0 697 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 JPH3Q8WXH2 748 aaPredicted RBP14.89□□□□□ -0.03
LSM1-203ENST00000520755 ALKBH8Q96BT7 664 aaKnown RBP14.89□□□□□ -0.03
LSM1-203ENST00000520755 NRTNQ99748 197 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 HGH1Q9BTY7 390 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 TFB2MQ9H5Q4 396 aaKnown RBP14.89□□□□□ -0.03
LSM1-203ENST00000520755 NMRAL1Q9HBL8 299 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 KCNK4Q9NYG8 393 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 PDE10AQ9Y233 779 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 COLEC10Q9Y6Z7 277 aa14.89□□□□□ -0.03
LSM1-203ENST00000520755 ADAMTS20P59510 1910 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 CNOT1A5YKK6 2376 aaKnown RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 PRPF4O43172 522 aaKnown RBP eCLIP14.88□□□□□ -0.03
LSM1-203ENST00000520755 ZW10O43264 779 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 B4GAT1O43505 415 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 PLIN3O60664 434 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 C1orf105O95561 183 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 C8GP07360 202 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 TPBGLP0DKB5 382 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 MTHFD2P13995 350 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 RPA3P35244 121 aaPredicted RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 GPR3P46089 330 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 CLDN6P56747 220 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 CCL7P80098 99 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 E2F1Q01094 437 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 NR1D2Q14995 579 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 ACAP2Q15057 778 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 PLCL1Q15111 1095 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 NKAIN2Q5VXU1 208 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 MBOAT1Q6ZNC8 495 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 UBE2R2Q712K3 238 aaPredicted RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 ADAMTSL2Q86TH1 951 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 RBM12BQ8IXT5 1001 aaKnown RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 GOLGA6L1Q8N7Z2 621 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 OR5K2Q8NHB8 316 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 TCP10LQ8TDR4 215 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 PKNOX2Q96KN3 472 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 SLC12A9Q9BXP2 914 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 ZMYND15Q9H091 742 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 TRIT1Q9H3H1 467 aaKnown RBP14.88□□□□□ -0.03
LSM1-203ENST00000520755 LRRN3Q9H3W5 708 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 MVB12BQ9H7P6 319 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 MED4Q9NPJ6 270 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 CIDEBQ9UHD4 219 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 DCDC2Q9UHG0 476 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 UNC13CQ8NB66 2214 aa14.88□□□□□ -0.03
LSM1-203ENST00000520755 TMEM120BA0PK00 339 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 SLC16A5O15375 505 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 KERAO60938 352 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 DKK1O94907 266 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 CDK4P11802 303 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 NDUFS1P28331 727 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 ETV4P43268 484 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 INSM1Q01101 510 aaPredicted RBP14.87□□□□□ -0.03
LSM1-203ENST00000520755 PRKG2Q13237 762 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 DCUN1D3Q8IWE4 304 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 FBXO15Q8NCQ5 510 aaPredicted RBP14.87□□□□□ -0.03
LSM1-203ENST00000520755 RHEBL1Q8TAI7 183 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 EXT2Q93063 718 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 AHCYL2Q96HN2 611 aaKnown RBP14.87□□□□□ -0.03
LSM1-203ENST00000520755 FOPNLQ96NB1 174 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 MENTQ9BUN1 341 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 UCK1Q9HA47 277 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 ATXN7L1Q9ULK2 861 aaPredicted RBP14.87□□□□□ -0.03
LSM1-203ENST00000520755 TDRKHQ9Y2W6 561 aaKnown RBP14.87□□□□□ -0.03
LSM1-203ENST00000520755 PLLPQ9Y342 182 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 OARD1Q9Y530 152 aa14.87□□□□□ -0.03
LSM1-203ENST00000520755 IGHV1OR21-1A0A087WYE8 117 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 A0A1W2PQM1 296 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms