RNA–Protein interactions for RNA: ENST00000520429.5

CCNC-210, Transcript of cyclin C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCNC, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-210ENST00000520429 METAP1P53582 386 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 NR1H2P55055 460 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 SLC14A1Q13336 389 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 CCSMST1Q4G0I0 132 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 LY6G5CQ5SRR4 150 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 ZNF551Q7Z340 670 aaPredicted RBP13.71□□□□□ -0.21
CCNC-210ENST00000520429 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 C9orf16Q9BUW7 83 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 CLMPQ9H6B4 373 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 RDH14Q9HBH5 336 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 ASAH2Q9NR71 780 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 PPIL1Q9Y3C6 166 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 PCDHB14Q9Y5E9 798 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.21
CCNC-210ENST00000520429 IGLV3-16A0A075B6K0 115 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TMX2-CTNND1H3BSU7 103 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 CLDN9O95484 217 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 LDLRP01130 860 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 CTSLP07711 333 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 PABPC1P11940 636 aaKnown RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 MYF6P23409 242 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 OR52E6Q96RD3 313 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 SLC32A1Q9H598 525 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 SERHLQ9NQF3 203 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 GPRC5BQ9NZH0 403 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 EIF3LQ9Y262 564 aaKnown RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 FADS3Q9Y5Q0 445 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 FADS2P1A8MWK0 482 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 LEFTY1O75610 366 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 EFNA1P20827 205 aaPredicted RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 ALDH3B2P48448 385 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 CYP4F3Q08477 520 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TMTC4Q5T4D3 741 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 GCNT7Q6ZNI0 430 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 OR2T12Q8NG77 320 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ASB11Q8WXH4 323 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 PAWRQ96IZ0 340 aaKnown RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 EBPLQ9BY08 206 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 CLK4Q9HAZ1 481 aaKnown RBP13.7□□□□□ -0.22
CCNC-210ENST00000520429 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 TRPS1Q9UHF7 1281 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ITM2BQ9Y287 266 aa13.7□□□□□ -0.22
CCNC-210ENST00000520429 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 CLOCKO15516 846 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 POP4O95707 220 aaKnown RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 ATP1B2P14415 290 aaPredicted RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 CD22P20273 847 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 GDPD4Q6W3E5 623 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 PROSER1Q86XN7 944 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 GOLM1Q8NBJ4 401 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ING5Q8WYH8 240 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 SGCDQ92629 289 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 SMURF2Q9HAU4 748 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCNC-210ENST00000520429 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ANTXRLA6NF34 631 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 SLC28A1O00337 649 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 NPPAP01160 153 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ANXA6P08133 673 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 MYCLP1P12525 358 aaPredicted RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 CDH1P12830 882 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 GBX1Q14549 363 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 LRRC3BQ96PB8 259 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 SLC12A9Q9BXP2 914 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 PARVBQ9HBI1 364 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 SMPD3Q9NY59 655 aaPredicted RBP13.69□□□□□ -0.22
CCNC-210ENST00000520429 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ADGRE2Q9UHX3 823 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ZNF639Q9UID6 485 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 MAGEL2Q9UJ55 1249 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 DMTF1Q9Y222 760 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 PCDHGA11Q9Y5H2 935 aa13.69□□□□□ -0.22
CCNC-210ENST00000520429 GRM6O15303 877 aa13.68□□□□□ -0.22
CCNC-210ENST00000520429 SDC1P18827 310 aa13.68□□□□□ -0.22
CCNC-210ENST00000520429 MSH3P20585 1137 aa13.68□□□□□ -0.22
CCNC-210ENST00000520429 ELK4P28324 431 aa13.68□□□□□ -0.22
CCNC-210ENST00000520429 SHMT2P34897 504 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms