RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LRIT3Q3SXY7 679 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ANXA2RQ3ZCQ2 193 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FAM174BQ3ZCQ3 159 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCDC122Q5T0U0 273 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 DCST1Q5T197 706 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ALS2CLQ60I27 953 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 TBC1D9BQ66K14 1250 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRSS55Q6UWB4 352 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF813Q6ZN06 617 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PQLC2Q6ZP29 291 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MEPCEQ7L2J0 689 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FAM228AQ86W67 206 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZDHHC13Q8IUH4 622 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PALM2Q8IXS6 379 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 GPR135Q8IZ08 494 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 APCDD1Q8J025 514 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 BOLLQ8N9W6 283 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR4N2Q8NGD1 307 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR52J3Q8NH60 311 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 WIPF2Q8TF74 440 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 DPF1Q92782 380 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CELF1Q92879 486 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 NT5C3BQ969T7 300 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FKBP10Q96AY3 582 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 NACC2Q96BF6 587 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 LRRC39Q96DD0 335 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 C11orf24Q96F05 449 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 OXNAD1Q96HP4 312 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 VCPIP1Q96JH7 1222 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ATP6V1G3Q96LB4 118 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF583Q96ND8 569 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MYADMQ96S97 322 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RIOK1Q9BRS2 568 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 IDI2Q9BXS1 227 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RNF26Q9BY78 433 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FRMD8Q9BZ67 464 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 GLT8D2Q9H1C3 349 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 EXO5Q9H790 373 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 WDR6Q9NNW5 1121 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 SIRT5Q9NXA8 310 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 DONSONQ9NYP3 566 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 IL20RAQ9UHF4 553 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ADAM29Q9UKF5 820 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 SH3GLB1Q9Y371 365 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 A3GALT2U3KPV4 340 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MST1RQ04912 1400 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PARD3Q8TEW0 1356 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 KIF16BQ96L93 1317 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRGV11A0A075B6L2 103 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A0U1RQV5 110 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ILVBLA1L0T0 632 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 FAM149AA5PLN7 773 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CXorf65A6NEN9 183 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NDUFS8O00217 210 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MATN2O00339 956 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CYP27B1O15528 508 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PSMD3O43242 534 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 LRRTM2O43300 516 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 SSX4O60224 188 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 SNNO75324 88 aaPredicted RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CSO75390 466 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 GCATO75600 419 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PDE9AO76083 593 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 KDM4BO94953 1096 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 YEATS4O95619 227 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 FGFR1OPO95684 399 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 GAS8O95995 478 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ELANEP08246 267 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CD63P08962 238 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MMP10P09238 476 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZCCHC18P0CG32 403 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 TFPIP10646 304 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NEFHP12036 1026 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MYL6BP14649 208 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 GCFC2P16383 781 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ITGA3P26006 1051 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ITPKBP27987 946 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 HSD17B3P37058 310 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CAPGP40121 348 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NSFP46459 744 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 LIMS1P48059 325 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CXCR3P49682 368 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 NUDT6P53370 316 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 AP3M2P53677 418 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MAPK12P53778 367 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CXADRP78310 365 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 DLK1P80370 383 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 CFHR3Q02985 330 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 HNRNPDQ14103 355 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ELAVL1Q15717 326 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 MEP1AQ16819 746 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 SYTL3Q4VX76 610 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 PDCD4Q53EL6 469 aaKnown RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 LACTB2Q53H82 288 aaPredicted RBP3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ESCO2Q56NI9 601 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 ARMC12Q5T9G4 340 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 VWA5B1Q5TIE3 1220 aa3.82□□□□□ -1.8
RNU4-60P-201ENST00000517239 RNF207Q6ZRF8 634 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms