RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 DMPKQ09013 629 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GOLGA8DPQ0D2H9 430 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SGCGQ13326 291 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF177Q13360 481 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CDH18Q13634 790 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TRIM14Q14142 442 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MTF1Q14872 753 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GPR68Q15743 365 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ADIPOQQ15848 244 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 DPCR1Q3MIW9 517 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 XKR4Q5GH76 650 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GPR157Q5UAW9 335 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF534Q76KX8 674 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 COMMD2Q86X83 199 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C17orf53Q8N3J3 647 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 AFAP1Q8N556 730 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CPSF7Q8N684 471 aaKnown RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ENAHQ8N8S7 591 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 OR52B6Q8NGF0 335 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RNF128Q8TEB7 428 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SGCDQ92629 289 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RILPL2Q969X0 211 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF582Q96NG8 517 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MAP3K3Q99759 626 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PYM1Q9BRP8 204 aaKnown RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SCRT1Q9BWW7 348 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PHF7Q9BWX1 381 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 STRA6Q9BX79 667 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MTHFD2LQ9H903 347 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HHATLQ9HCP6 504 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RANGRFQ9HD47 186 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RPS6KB2Q9UBS0 482 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HSF4Q9ULV5 492 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PPP2R2CQ9Y2T4 447 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 DHX57Q6P158 1386 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF541Q9H0D2 1346 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 E7ENQ6 273 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PDXKO00764 312 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TRAFD1O14545 582 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GAPDHSO14556 408 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TNFSF11O14788 317 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SMAD9O15198 467 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NDUFS3O75489 264 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TRUB2O95900 331 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MT-ND1P03886 318 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 FAM200BP0CF97 657 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 IGHV4-31P0DP07 118 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 UMPSP11172 480 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PCP11498 1178 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CD1EP15812 388 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RPL35AP18077 110 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CDH3P22223 829 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SLC6A6P31641 620 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RIDAP52758 137 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MAZP56270 477 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TAS2R40P59535 323 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ERVK-16P61578 105 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TLE4Q04727 773 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 UBE3AQ05086 875 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 FRG1Q14331 258 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TAF5Q15542 800 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CCNG2Q16589 344 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ALG11Q2TAA5 492 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZSCAN23Q3MJ62 389 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 FAM109BQ6ICB4 259 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CCDC174Q6PII3 467 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 IGFL2Q6UWQ7 119 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HIPK1Q86Z02 1210 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ARHGAP12Q8IWW6 846 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RNF168Q8IYW5 571 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 H1FOOQ8IZA3 346 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RNF175Q8N4F7 328 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF561Q8N587 486 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C4orf32Q8N8J7 132 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CSNK1G2-AS1Q8NCQ2 148 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C11orf45Q8TAV5 145 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 POF1BQ8WVV4 589 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PSPC1Q8WXF1 523 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ST6GALNAC6Q969X2 333 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CNRIP1Q96F85 164 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 APOPT1Q96IL0 206 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C8orf48Q96LL4 319 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C10orf90Q96M02 699 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MAGEB18Q96M61 343 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SEPT5Q99719 369 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ABHD6Q9BV23 337 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GLIS2Q9BZE0 524 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LRRCC1Q9C099 1032 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SPHK1Q9NYA1 384 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NPAP1Q9NZP6 1156 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SLC25A10Q9UBX3 287 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CNOT8Q9UFF9 292 aaKnown RBP0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 AUP1Q9Y679 476 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SELENOKQ9Y6D0 94 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 POGZQ7Z3K3 1410 aa0.7□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ARHGEF40Q8TER5 1519 aa0.69□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GAKO14976 1311 aa0.69□□□□□ -2.3
RNU6-1258P-201ENST00000516911 A0A1B0GTH9 108 aa0.69□□□□□ -2.3
RNU6-1258P-201ENST00000516911 A0A1W2PRG0 241 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms