RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CORO6Q6QEF8 472 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 TMEM207Q6UWW9 146 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 C3P1Q6ZMU1 363 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 TBC1D26Q86UD7 250 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ERI1Q8IV48 349 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 WDR75Q8IWA0 830 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 BEST2Q8NFU1 509 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 PPP1R35Q8TAP8 253 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 SPPL2AQ8TCT8 520 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ARRDC3Q96B67 414 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 FAF2Q96CS3 445 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 PDXPQ96GD0 296 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 RIOK1Q9BRS2 568 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 SPNS1Q9H2V7 528 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ACKR4Q9NPB9 350 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 PCDH12Q9NPG4 1184 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 HINT3Q9NQE9 182 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC6A13Q9NSD5 602 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ARMCX1Q9P291 453 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 FRMD4AQ9P2Q2 1039 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 SRRM2Q9UQ35 2752 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 LTBP2Q14767 1821 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 UBR5O95071 2799 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 TRBV6-6A0A0A6YYG2 114 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 A0A1B0GUA9 196 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZSCAN5CA6NGD5 496 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 STX16-NPEPL1H3BU86 382 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 PRPF3O43395 683 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 BMP10O95393 424 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 PIGRP01833 764 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ANGP03950 147 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ANXA6P08133 673 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SP9P0CG40 484 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 IFI30P13284 250 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 VCAM1P19320 739 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 EDN2P20800 178 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 CA4P22748 312 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 KLRK1P26718 216 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 TNFRSF4P43489 277 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 PCP4P48539 62 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 MVDP53602 400 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 RIPPLY3P57055 190 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 VLDLRP98155 873 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SF3A3Q12874 501 aaKnown RBP eCLIP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 BYSLQ13895 437 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 HERPUD1Q15011 391 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 RPS6KA1Q15418 735 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SLC25A53Q5H9E4 307 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 NHSL2Q5HYW2 709 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 LY6G6FQ5SQ64 297 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SYDE2Q5VT97 1194 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 GGNBP1Q5YKI7 109 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 KLC3Q6P597 504 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SCARA5Q6ZMJ2 495 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 DENND5BQ6ZUT9 1274 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 LINGO2Q7L985 606 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZNF554Q86TJ5 538 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 OR1J1Q8NGS3 322 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 OR1L3Q8NH93 324 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 C9orf43Q8TAL5 461 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 DIS3LQ8TF46 1054 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 FBXL8Q96CD0 374 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 NSL1Q96IY1 281 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 MSLNLQ96KJ4 702 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SPATA17Q96L03 361 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 FOPNLQ96NB1 174 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 HNRNPABQ99729 332 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 CLPBQ9H078 707 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 CAAP1Q9H8G2 361 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 SEPSECSQ9HD40 501 aaKnown RBP-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 HPS4Q9NQG7 708 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 NPAP1Q9NZP6 1156 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 HACL1Q9UJ83 578 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ITGA11Q9UKX5 1188 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 DTNAQ9Y4J8 743 aa-1.1□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZNF541Q9H0D2 1346 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 IGHV3-20A0A0C4DH32 117 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 A8MU76 341 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 H3BML4 177 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 AREL1O15033 823 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 HOXC11O43248 304 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 RETP07949 1114 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 WARSP23381 471 aaKnown RBP-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 OPRD1P41143 372 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 SUCLG1P53597 346 aaKnown RBP-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZNF74Q16587 644 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 C5orf47Q569G3 176 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 EMBQ6PCB8 327 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZNF600Q6ZNG1 722 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 RASGRP2Q7LDG7 609 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 PRSS45Q7RTY3 260 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 RPAINQ86UA6 219 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 SUGP1Q8IWZ8 645 aaKnown RBP-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 GPALPP1Q8IXQ4 340 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 GPC2Q8N158 579 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 GHDCQ8N2G8 530 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZBTB2Q8N680 514 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 AVL9Q8NBF6 648 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 RNF149Q8NC42 400 aa-1.11□□□□□ -2.59
RNU6-542P-201ENST00000516405 GPRC5AQ8NFJ5 357 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms