RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 LRIT1Q9P2V4 623 aa6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 MID2Q9UJV3 735 aa6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 TDRKHQ9Y2W6 561 aaKnown RBP6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 OARD1Q9Y530 152 aa6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 CFAP20Q9Y6A4 193 aaKnown RBP6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
SCARNA6-201ENST00000515982 GOLGA4Q13439 2230 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CPED1A4D0V7 1026 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 EME2A4GXA9 379 aaPredicted RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 FAM221BA6H8Z2 402 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ARHGEF33A8MVX0 844 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 MYO1CO00159 1063 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CDC7O00311 574 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PPM1DO15297 605 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TNFSF14O43557 240 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SH3BP5O60239 455 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 KERAO60938 352 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SMIM24O75264 130 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SYF2O95926 243 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ANXA5P08758 320 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TPBGLP0DKB5 382 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CDK4P11802 303 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CKMT1AP12532 417 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CKMT2P17540 419 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 AMD1P17707 334 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TAC1P20366 129 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SHMT2P34897 504 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 HNMTP50135 292 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 RAB28P51157 221 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SLC18A1P54219 525 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 EPHA4P54764 986 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 MAZP56270 477 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 MAGOHP61326 146 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 IRF9Q00978 393 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 DLG1Q12959 904 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PRKG2Q13237 762 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ILKQ13418 452 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PLCL1Q15111 1095 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TSNQ15631 228 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CLPPQ16740 277 aaPredicted RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PROX2Q3B8N5 592 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ANKS6Q68DC2 871 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SULT1C3Q6IMI6 304 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ARMC6Q6NXE6 501 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SBSNQ6UWP8 590 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ZNF438Q7Z4V0 828 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 AMIGO1Q86WK6 493 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 NAXDQ8IW45 347 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SLC35F3Q8IY50 421 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SPATA6LQ8N4H0 392 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 BANPQ8N9N5 519 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 KYQ8NBH2 561 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 OR5AR1Q8NGP9 310 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 RDH11Q8TC12 318 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 NETO1Q8TDF5 533 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 LCN9Q8WX39 176 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PATE1Q8WXA2 126 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TLCD1Q96CP7 247 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CCDC126Q96EE4 140 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 AHCYL2Q96HN2 611 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 APOPT1Q96IL0 206 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CNDP2Q96KP4 475 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ATP6V1G3Q96LB4 118 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 GPR78Q96P69 363 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PKP4Q99569 1192 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 DPYSL5Q9BPU6 564 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PCBD2Q9H0N5 130 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 MRPL46Q9H2W6 279 aaKnown RBP6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SRMSQ9H3Y6 488 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 SLC32A1Q9H598 525 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ALG9Q9H6U8 611 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 KCNK9Q9NPC2 374 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 MED4Q9NPJ6 270 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 RXFP3Q9NSD7 469 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 ARL15Q9NXU5 204 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 NUDT4Q9NZJ9 180 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 OR6C2Q9NZP2 312 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 CD274Q9NZQ7 290 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 TMEM216Q9P0N5 145 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 FTSJ1Q9UET6 329 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PDE10AQ9Y233 779 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 PLLPQ9Y342 182 aa6.87□□□□□ -1.31
SCARNA6-201ENST00000515982 NPEPPSL1A6NEC2 478 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 LILRA5A6NI73 299 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 FOXO6A8MYZ6 492 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 MATN2O00339 956 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 SLC30A4O14863 429 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 TM9SF1O15321 606 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 PRPF4O43172 522 aaKnown RBP eCLIP6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 GDF9O60383 454 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 SPAG7O75391 227 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 SASH3O75995 380 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 ZWINTO95229 277 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 FKBP9O95302 570 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 GUCA1CO95843 209 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 GP1BAP07359 652 aa6.86□□□□□ -1.31
SCARNA6-201ENST00000515982 CCND1P24385 295 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms