RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 OLIG1Q8TAK6 271 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 GRHL3Q8TE85 626 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 JAKMIP2Q96AA8 810 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 LRRC59Q96AG4 307 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 NSUN4Q96CB9 384 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CALML4Q96GE6 196 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 FAM81BQ96LP2 452 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 SYT11Q9BT88 431 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 TEX12Q9BXU0 123 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CCDC68Q9H2F9 335 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 PSD3Q9NYI0 1048 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 ADD3Q9UEY8 706 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 TBC1D29Q9UFV1 150 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 ASIC3Q9UHC3 531 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 GPR34Q9UPC5 381 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 TMEM5Q9Y2B1 443 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 TDRD15B5MCY1 1934 aaKnown RBP3.4□□□□□ -1.87
LINC01088-211ENST00000515597 CAMSAP1Q5T5Y3 1602 aa3.4□□□□□ -1.87
LINC01088-211ENST00000515597 UHRF1BP1Q6BDS2 1440 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 LOC100509620A0A075B734 347 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 A0A1W2PQ09 198 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 A0A1W2PRB8 838 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 KHDRBS3O75525 346 aaKnown RBP3.39□□□□□ -1.87
LINC01088-211ENST00000515597 PIGNO95427 931 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 EFNA1P20827 205 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-211ENST00000515597 PNLIPRP2P54317 469 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 TMF1P82094 1093 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 PLA2G7Q13093 441 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 MELKQ14680 651 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 PSRC1Q6PGN9 363 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-211ENST00000515597 TMCO3Q6UWJ1 677 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 Q6ZSR9 355 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 INTS8Q75QN2 995 aaKnown RBP3.39□□□□□ -1.87
LINC01088-211ENST00000515597 DNAJC22Q8N4W6 341 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 POC5Q8NA72 575 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 MCUQ8NE86 351 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 OR2T11Q8NH01 316 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 HPSE2Q8WWQ2 592 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 MTERF3Q96E29 417 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 KIFC3Q9BVG8 833 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 ARRDC1-AS1Q9H2J1 176 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 TAS2R14Q9NYV8 317 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 FBXO2Q9UK22 296 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-211ENST00000515597 RICTORQ6R327 1708 aa3.39□□□□□ -1.87
LINC01088-211ENST00000515597 STRCP1A6NGW2 1772 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 hCG_1807616A0A1W2PRN6 198 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 LNP1A1A4G5 178 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 TOM1O60784 492 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 GJA1P17302 382 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 SLC6A12P48065 614 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 SUOXP51687 545 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 CXCL9Q07325 125 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 DLG2Q15700 870 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 NTRK2Q16620 822 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 C15orf59Q2T9L4 293 aaPredicted RBP3.38□□□□□ -1.87
LINC01088-211ENST00000515597 FAM98BQ52LJ0 330 aaKnown RBP3.38□□□□□ -1.87
LINC01088-211ENST00000515597 TCTE1Q5JU00 501 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 CYP4A22Q5TCH4 519 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 PPFIBP2Q8ND30 876 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 FGFBP3Q8TAT2 258 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 NSL1Q96IY1 281 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 C18orf12Q96KH6 178 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 IWS1Q96ST2 819 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 VN1R1Q9GZP7 353 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 PPIL3Q9H2H8 161 aaKnown RBP3.38□□□□□ -1.87
LINC01088-211ENST00000515597 INTS9Q9NV88 658 aaKnown RBP3.38□□□□□ -1.87
LINC01088-211ENST00000515597 RNF186Q9NXI6 227 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 HACL1Q9UJ83 578 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 OSGIN1Q9UJX0 560 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 TCOF1Q13428 1488 aaKnown RBP3.38□□□□□ -1.87
LINC01088-211ENST00000515597 C3P01024 1663 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 MYH15Q9Y2K3 1946 aa3.38□□□□□ -1.87
LINC01088-211ENST00000515597 FHOD3Q2V2M9 1422 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 COL5A2P05997 1499 aaPredicted RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 LOC101059948A0A1B0GTJ6 334 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 AVILO75366 819 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 CDC123O75794 336 aaPredicted RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 PORP16435 677 aaPredicted RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 MATR3P43243 847 aaKnown RBP eCLIP3.37□□□□□ -1.871e-6■■■■□ 22.8
LINC01088-211ENST00000515597 MAGEA11P43364 429 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 NRIP1P48552 1158 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 SIRPAP78324 504 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 CDR2Q01850 454 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 SP3Q02447 781 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 PRKCZQ05513 592 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 RRS1Q15050 365 aaKnown RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 TAF13Q15543 124 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 WDR78Q5VTH9 848 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 KRT79Q5XKE5 535 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 DHRS7BQ6IAN0 325 aaPredicted RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 TRIM65Q6PJ69 517 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 HAUS6Q7Z4H7 955 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 PIGZQ86VD9 579 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 LSMEM2Q8N112 164 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 BMPERQ8N8U9 685 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 TMEM178AQ8NBL3 297 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms