RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 RBM4Q9BWF3 364 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PAPOLGQ9BWT3 736 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 OLA1Q9NTK5 396 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF69Q9UC07 566 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 STOML2Q9UJZ1 356 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ASB4Q9Y574 426 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TRPV2Q9Y5S1 764 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 GREB1Q4ZG55 1949 aa7.34□□□□□ -1.24
PDLIM5-219ENST00000514743 CASP8AP2Q9UKL3 1982 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 NCF1BA6NI72 391 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 NCF1CA8MVU1 366 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 H3BMM5 538 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 AP3D1O14617 1153 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CPNE3O75131 537 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 KCNH1O95259 989 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 AP2A1O95782 977 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 MBP02144 154 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 LTFP02788 710 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 HOXD4P09016 255 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ERVK-10P10266 1014 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF250P15622 560 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TIMP2P16035 220 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DDX6P26196 483 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CYP2C18P33260 490 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 LHX1P48742 406 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 GALNT2Q10471 571 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SERINC3Q13530 473 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TIGD6Q17RP2 521 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TCTE1Q5JU00 501 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 BHLHB9Q6PI77 547 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 KYAT3Q6YP21 454 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DSELQ8IZU8 1212 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PNPT1Q8TCS8 783 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CERS2Q96G23 380 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 RILPQ96NA2 401 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 EBF4Q9BQW3 602 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 COLEC11Q9BWP8 271 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC19A3Q9BZV2 496 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 AGO3Q9H9G7 860 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ZFP57Q9NU63 452 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ENPP5Q9UJA9 477 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 RUVBL1Q9Y265 456 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CASTOR2A6NHX0 329 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 B2RBV5 119 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PLIN3O60664 434 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 EIF1BO60739 113 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 LYPLA1O75608 230 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 IGLV3-25P01717 112 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 THP07101 528 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ASGR1P07306 291 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 C8BP07358 591 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 HOXB8P17481 243 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SYN1P17600 705 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 MX2P20592 715 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 HSD3B2P26439 372 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 EIF1P41567 113 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CXCR3P49682 368 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CSRP3P50461 194 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 RENBPP51606 427 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ABCE1P61221 599 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CTBSQ01459 385 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 GRIK2Q13002 908 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 AANATQ16613 207 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 FASTKD1Q53R41 847 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PPM1JQ5JR12 505 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 C6orf52Q5T4I8 152 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 N4BP2L1Q5TBK1 243 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 MAVSQ7Z434 540 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 HDDC2Q7Z4H3 204 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM135Q86UB9 458 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 EPHX4Q8IUS5 362 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 RASGRP3Q8IV61 690 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 KLHDC8BQ8IXV7 354 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CAMKK1Q8N5S9 505 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PTP4A1Q93096 173 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 MYLPFQ96A32 169 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SORT1Q99523 831 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 THTPAQ9BU02 230 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ACPTQ9BZG2 426 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM216Q9P0N5 145 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CDH9Q9ULB4 789 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CSNK1G3Q9Y6M4 447 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF197O14709 1029 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ANGPT2O15123 496 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CTSHP09668 335 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 NR2C1P13056 603 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PSMC3P17980 439 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 OGNP20774 298 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DNAJA1P31689 397 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 AQP5P55064 265 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TPI1P60174 286 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ART3Q13508 389 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 UBAP2LQ14157 1087 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SPANXN3Q5MJ09 141 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms