RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SERPINB8P50452 374 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 EPHA4P54764 986 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ADARP55265 1226 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 ZFP36L1Q07352 338 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 IFT88Q13099 833 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 BMPR2Q13873 1038 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 KRT33BQ14525 404 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ZKSCAN8Q15776 578 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 TYSND1Q2T9J0 566 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 CCDC153Q494R4 210 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ZNF658BQ4V348 819 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 RNF187Q5TA31 235 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 NKAIN2Q5VXU1 208 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 PTRHD1Q6GMV3 140 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 TMEM71Q6P5X7 295 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 XKR5Q6UX68 686 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ZNF574Q6ZN55 896 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 OTOAQ7RTW8 1153 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 TRPM8Q7Z2W7 1104 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 CCDC91Q7Z6B0 441 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 STRA8Q7Z7C7 330 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ZNF761Q86XN6 746 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 LSMEM2Q8N112 164 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 GABPB2Q8TAK5 448 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 CALML6Q8TD86 181 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ASZ1Q8WWH4 475 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 NCSTNQ92542 709 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 GATA6Q92908 595 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 C12orf66Q96MD2 445 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 FAM111AQ96PZ2 611 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 PANX3Q96QZ0 392 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 FAM167BQ9BTA0 163 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 TBC1D10AQ9BXI6 508 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 STRADBQ9C0K7 418 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 P2RY12Q9H244 342 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 OR52A5Q9H2C5 316 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ACTR5Q9H9F9 607 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 PDP2Q9P2J9 529 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 TXNDC16Q9P2K2 825 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 SLC17A6Q9P2U8 582 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 FAM8A1Q9UBU6 413 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 GNPTGQ9UJJ9 305 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ATXN7L1Q9ULK2 861 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 SLC12A4Q9UP95 1085 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 PCDHB1Q9Y5F3 818 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 ENTPD2Q9Y5L3 495 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 HEBP2Q9Y5Z4 205 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 PRAMEF33A0A0G2JMD5 474 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 UBA6A0AVT1 1052 aaPredicted RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 IQCF5A8MTL0 148 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 D6RAR5 112 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 H3BMM5 538 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 DUX1O43812 170 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 GPC4O75487 556 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 KIAA0754O94854 1291 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 UBXN7O94888 489 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 AHSGP02765 367 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 ESR1P03372 595 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 PROCP04070 461 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 MTHFD1P11586 935 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 PKMP14618 531 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 HOXB3P14651 431 aaPredicted RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 ITGB6P18564 788 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 CHRM3P20309 590 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 AOAHP28039 575 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 GABRB3P28472 473 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 PDHA2P29803 388 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 CCKBRP32239 447 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 CCR7P32248 378 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 SKIV2L2P42285 1042 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 LEPRP48357 1165 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 INHBCP55103 352 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 OCRLQ01968 901 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 CFHR1Q03591 330 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 HSPA14Q0VDF9 509 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 EIF3IQ13347 325 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 CTBP1Q13363 440 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 TRA2AQ13595 282 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCL28-204ENST00000514421 GPR18Q14330 331 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 RTP5Q14D33 572 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 WDR74Q6RFH5 385 aaPredicted RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 PLXDC1Q8IUK5 500 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 SLITRK4Q8IW52 837 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 OR4D9Q8NGE8 314 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 WDR36Q8NI36 951 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 C10orf82Q8WW14 230 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 TFGQ92734 400 aaPredicted RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 TMEM159Q96B96 161 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 ATXN7L3BQ96GX2 97 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 BIRC8Q96P09 236 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 FERD3LQ96RJ6 166 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 IQCGQ9H095 443 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 C12orf65Q9H3J6 166 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms