RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 AGAP14A8MT82 685 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 SMTNL1A8MU46 457 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 CFAP99D6REC4 459 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 CCL21O00585 134 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 TPBGLP0DKB5 382 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 MFAP5Q13361 173 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 RBBP7Q16576 425 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 ZNF630Q2M218 657 aaPredicted RBP19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 TUBB8Q3ZCM7 444 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 KAZNQ674X7 775 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 RPUSD3Q6P087 351 aaKnown RBP19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 BNC2Q6ZN30 1099 aaPredicted RBP19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 ULK4Q96C45 1275 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 TRIM8Q9BZR9 551 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 CHRNA10Q9GZZ6 450 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 CHST11Q9NPF2 352 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 EURLQ9NYK6 297 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 PLA2G3Q9NZ20 509 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 SUCOQ9UBS9 1254 aaKnown RBP19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 RSPH14Q9UHP6 348 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 LCMT1Q9UIC8 334 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 SH3BGRL2Q9UJC5 107 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 HYOU1Q9Y4L1 999 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 NF1P21359 2839 aa19.52■□□□□ 0.72
SQSTM1-215ENST00000514093 ISM1B1AKI9 464 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 CST8O60676 142 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 SHMT2P34897 504 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 NR2C2P49116 596 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 ARG2P78540 354 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 ZBED6P86452 979 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 VWA2Q5GFL6 755 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 ZNF449Q6P9G9 518 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 COX15Q7KZN9 410 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 ZNF295-AS1Q8N0V1 137 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 CLDN19Q8N6F1 224 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 METTL27Q8N6F8 245 aaPredicted RBP19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 OR11G2Q8NGC1 345 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 NR4A3Q92570 626 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 FKBP10Q96AY3 582 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 HAUS1Q96CS2 278 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 CTSFQ9UBX1 484 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 ASF1AQ9Y294 204 aa19.51■□□□□ 0.71
SQSTM1-215ENST00000514093 MED13LQ71F56 2210 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 C5orf60A6NFR6 353 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 F10P00742 488 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 PRSS56P0CW18 603 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 PEBP1P30086 187 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 GCGRP47871 477 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 KRTAP10-9P60411 292 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 BRD3Q15059 726 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 BZW1Q7L1Q6 419 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 SNX20Q7Z614 316 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 ZNF808Q8N4W9 903 aaPredicted RBP19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 DTWD1Q8N5C7 304 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 SLC35G2Q8TBE7 412 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 LMF1Q96S06 567 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 BPIFA3Q9BQP9 254 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 GORASP1Q9BQQ3 440 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 TRIM56Q9BRZ2 755 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 C10orf88Q9H8K7 445 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 WDR54Q9H977 334 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 ZDHHC3Q9NYG2 299 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 CAPN11Q9UMQ6 739 aa19.5■□□□□ 0.71
SQSTM1-215ENST00000514093 A0A1B0GX78 115 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 UNC5CO95185 931 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 ALBP02768 609 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 ITGALP20701 1170 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 MAGP20916 626 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 MCM3P25205 808 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 OR1D4P47884 311 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 RPA4Q13156 261 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 SLC5A12Q1EHB4 618 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 TMEM207Q6UWW9 146 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 NAPRTQ6XQN6 538 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 MCATQ8IVS2 390 aaKnown RBP19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 HEXDCQ8WVB3 486 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 DLG3Q92796 817 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 VPS37BQ9H9H4 285 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 MRM3Q9HC36 420 aaKnown RBP19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 ZNF160Q9HCG1 818 aa19.49■□□□□ 0.71
SQSTM1-215ENST00000514093 PIM1P11309 404 aaPredicted RBP19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 MC4RP32245 332 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 PBX1P40424 430 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 GRIA3P42263 894 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 CDKN2BP42772 138 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 ARSFP54793 590 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 SERPINA9Q86WD7 417 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 LMNTD1Q8N9Z9 388 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 C8orf44Q96CB5 159 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 VAT1Q99536 393 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 CUTCQ9NTM9 273 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 OR6C2Q9NZP2 312 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 PTGFRNQ9P2B2 879 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 LUC7L2Q9Y383 392 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 MAU2Q9Y6X3 613 aa19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 SNRNP200O75643 2136 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-215ENST00000514093 IGLV3-16A0A075B6K0 115 aa19.47■□□□□ 0.71
SQSTM1-215ENST00000514093 ONECUT2O95948 504 aa19.47■□□□□ 0.71
SQSTM1-215ENST00000514093 TMEM253P0C7T8 217 aa19.47■□□□□ 0.71
SQSTM1-215ENST00000514093 MST1P26927 711 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms