RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANKRD66B4E2M5 251 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 NDUFS4O43181 175 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 GPAA1O43292 621 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 FLOT1O75955 427 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 ZWINTO95229 277 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 PMS2P2O95744 297 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TSPY3P0CV98 308 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TSPY8P0CW00 308 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 EEF2P13639 858 aaKnown RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 SELLP14151 372 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 EEF1DP29692 281 aaKnown RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 CCKBRP32239 447 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 HSD17B4P51659 736 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 MLLT10P55197 1068 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 DSCR9P59020 149 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 COG7P83436 770 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 ZXDBP98169 803 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 ZNF155Q12901 538 aaPredicted RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 DLG1Q12959 904 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 BECN1Q14457 450 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 NFATC4Q14934 902 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 PCLAFQ15004 111 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 RASA2Q15283 850 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SNAPC1Q16533 368 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 MCMDC2Q4G0Z9 681 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 FAM98BQ52LJ0 330 aaKnown RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 FAM69BQ5VUD6 431 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 KRT79Q5XKE5 535 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 NSUN5P2Q63ZY6 315 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TMEM179Q6ZVK1 233 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TSPAN33Q86UF1 283 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 EXOC3L1Q86VI1 746 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 KMT5CQ86Y97 462 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 RASGEF1CQ8N431 466 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 MINDY1Q8N5J2 469 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 GCSAMQ8N6F7 178 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 C1orf52Q8N6N3 182 aaKnown RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 IL17RCQ8NAC3 791 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 B4GALNT2Q8NHY0 566 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SLC38A5Q8WUX1 472 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TMEM255BQ8WV15 326 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SECTM1Q8WVN6 248 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 FIG4Q92562 907 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 MTERF3Q96E29 417 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 BICD1Q96G01 975 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SCMH1Q96GD3 660 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 DACH2Q96NX9 599 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 DEFB118Q96PH6 123 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 HGH1Q9BTY7 390 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SPATC1LQ9H0A9 340 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 DENND2DQ9H6A0 471 aaPredicted RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 FKRPQ9H9S5 495 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 PFDN4Q9NQP4 134 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 TCP11L1Q9NUJ3 509 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 SELENONQ9NZV5 590 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 PLAGL1Q9UM63 463 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 FAM169AQ9Y6X4 670 aa4.09□□□□□ -1.75
HTT-210ENST00000512909 RPAP1Q9BWH6 1393 aaPredicted RBP4.09□□□□□ -1.75
HTT-210ENST00000512909 AK9Q5TCS8 1911 aa4.09□□□□□ -1.76
HTT-210ENST00000512909 LNP1A1A4G5 178 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 MAGEA13PA6NCF6 341 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 TMEM189-UBE2V1I3L0A0 370 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 INO80B-WBP1J3KQ70 363 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 SH2B2O14492 632 aaPredicted RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 DVL1O14640 695 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 ACOT8O14734 319 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 BMP10O95393 424 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 BCL10O95999 233 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 KRT19P08727 400 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 NR2F1P10589 423 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 UGT1A1P22309 533 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 ACADLP28330 430 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 RGS19P49795 217 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 ZNF75DP51815 510 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 DVL1P1P54792 670 aaPredicted RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 CLDN20P56880 219 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 HAND2P61296 217 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 SIRPAP78324 504 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 UBE2V1Q13404 147 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 GTF2H2Q13888 395 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 DLG2Q15700 870 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 LETM2Q2VYF4 491 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 C9orf152Q5JTZ5 239 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 GARNL3Q5VVW2 1013 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 MFSD14CQ5VZR4 134 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 KRT39Q6A163 491 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 GTF2H2CQ6P1K8 395 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 CWC27Q6UX04 472 aaKnown RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 ZDHHC17Q8IUH5 632 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 SCML4Q8N228 414 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 GUF1Q8N442 669 aaKnown RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 FBXO39Q8N4B4 442 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 METTL27Q8N6F8 245 aaPredicted RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 LSMEM1Q8N8F7 131 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 KCTD6Q8NC69 237 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 OR2AK2Q8NG84 335 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 LPGAT1Q92604 370 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms