RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 ABHD18Q0P651 414 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 FADDQ13158 208 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 NPTX1Q15818 432 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 KDM4DQ6B0I6 523 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 TAS2R42Q7RTR8 314 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CYP4Z1Q86W10 505 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ZNF280BQ86YH2 543 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 PHACTR4Q8IZ21 702 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 KRTCAP2Q8N6L1 136 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ATAD1Q8NBU5 361 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 NETO1Q8TDF5 533 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 USP7Q93009 1102 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SPATA17Q96L03 361 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 OR52E6Q96RD3 313 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SPON2Q9BUD6 331 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 NSUN3Q9H649 340 aaKnown RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SLC6A13Q9NSD5 602 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ILVBLA1L0T0 632 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SYN3O14994 580 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 FTH1P02794 183 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 PTPN6P29350 595 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 FMO3P31513 532 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 HOXD12P35452 270 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 MAP2K4P45985 399 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 RGS4P49798 205 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 HMGCS1Q01581 520 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CLCA4Q14CN2 919 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 INAVAQ3KP66 663 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CERS6Q6ZMG9 384 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SNX20Q7Z614 316 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 RGL4Q8IZJ4 473 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 TRIB2Q92519 343 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 GLMNQ92990 594 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SIGLEC11Q96RL6 698 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CD244Q9BZW8 370 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX25-205ENST00000512853 CCSER2Q9H7U1 834 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 BPIFA1Q9NP55 256 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 IL17CQ9P0M4 197 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 OPTCQ9UBM4 332 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 KLQ9UEF7 1012 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 PKP3Q9Y446 797 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 PCDHGC4Q9Y5F7 938 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 E9PQ18 207 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 FFAR3O14843 346 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 PER2O15055 1255 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 GPR42O15529 346 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 KDM1AO60341 852 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TLR5O60602 858 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 SEMG1P04279 462 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 RHOCP08134 193 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 EBLN1P0CF75 366 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 BCKDHAP12694 445 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 CD40LGP29965 261 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 ALDH4A1P30038 563 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TGFBR2P37173 567 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 ST13P50502 369 aaKnown RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 FCGRTP55899 365 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 PHC1P78364 1004 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 CDC20Q12834 499 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 GBX1Q14549 363 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 CARD16Q5EG05 197 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TMEM236Q5W0B7 351 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 NCEH1Q6PIU2 408 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 MSANTD1Q6ZTZ1 278 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 LACC1Q8IV20 430 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 ELMOD1Q8N336 334 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TMEM132CQ8N3T6 1108 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 KIAA1958Q8N8K9 716 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 ITCHQ96J02 903 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 PITX2Q99697 317 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 RIBC2Q9H4K1 309 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms