RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UQCRC1P31930 480 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ASMTP46597 345 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CCR8P51685 355 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 ERVK-16P61578 105 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 POU5F1Q01860 360 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 PLA2G7Q13093 441 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 TMEM53Q6P2H8 277 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 UTS2BQ765I0 119 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 SLC26A11Q86WA9 606 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CRYBG2Q8N1P7 616 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OR52K2Q8NGK3 314 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OR10T2Q8NGX3 314 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 OR2L2Q8NH16 312 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 TNFAIP8L1Q8WVP5 186 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 TMEM234Q8WY98 164 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FAM3CQ92520 227 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 CNDP2Q96KP4 475 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 ADAD1Q96M93 576 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 TSPAN18Q96SJ8 248 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 LMAN1LQ9HAT1 526 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 TCF7L2Q9NQB0 619 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 KCNQ5Q9NR82 932 aa8.77□□□□□ -1.01
VCAN-208ENST00000512590 FARSBQ9NSD9 589 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 FCF1Q9Y324 198 aaKnown RBP8.77□□□□□ -1.01
VCAN-208ENST00000512590 NEO1Q92859 1461 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CRYM-AS1A6NIL9 109 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SOX1O00570 391 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 PRMT5O14744 637 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 RAD51CO43502 376 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 B4GAT1O43505 415 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ATG12O94817 140 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TACSTD2P09758 323 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZNF28P17035 718 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TACR2P21452 398 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 AP3S2P59780 193 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 HES1Q14469 280 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DSC3Q14574 896 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZNF423Q2M1K9 1284 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 VSIG10LQ86VR7 867 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TIGD4Q8IY51 512 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SCGB1C1Q8TD33 95 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 BSCL2Q96G97 398 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 CEP295NLQ96MC4 621 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 COPS4Q9BT78 406 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CPEB1Q9BZB8 566 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ABRACLQ9P1F3 81 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 RAI2Q9Y5P3 530 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 KLRC4-KLRK1H3BQV0 150 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ENPP3O14638 875 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 C9P02748 559 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ITGB5P18084 799 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ADH7P40394 386 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 PNLIPRP1P54315 467 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CACNG1Q06432 222 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DSC1Q08554 894 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 HEPACAMQ14CZ8 416 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 OASLQ15646 514 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ADRM1Q16186 407 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 PARP6Q2NL67 630 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DPY19L3Q6ZPD9 716 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ILDR1Q86SU0 546 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZNF676Q8N7Q3 588 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TRPV1Q8NER1 839 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 C2orf15Q8WU43 125 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 FBXL8Q96CD0 374 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 OR52E6Q96RD3 313 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 RAD9AQ99638 391 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TEX13DA0A0J9YY54 714 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 OR14I1A6ND48 311 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 FAM86B1E9PN63 330 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 EIF3HO15372 352 aaKnown RBP eCLIP8.76□□□□□ -1.01
VCAN-208ENST00000512590 FAM86B2P0C5J1 330 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TSFMP43897 325 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 KCNJ1P48048 391 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ITIH4Q14624 930 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 RASA2Q15283 850 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ACSM3Q53FZ2 586 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 WDR53Q7Z5U6 358 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 FAM86B1Q8N7N1 296 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SCCPDHQ8NBX0 429 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 OR9A4Q8NGU2 314 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 AUTS2Q8WXX7 1259 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SORCS1Q8WY21 1168 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ALPK1Q96QP1 1244 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 LYARQ9NX58 379 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 CCDC167Q9P0B6 97 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ST14Q9Y5Y6 855 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CFAP43Q8NDM7 1665 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 LRIG2O94898 1065 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 C8GP07360 202 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZSCAN5DPP0CG00 497 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 MATKP42679 507 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms