RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MAGEA8P43361 318 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 DIO1P49895 249 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 NOVA1P51513 510 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 MVDP53602 400 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 COPB1P53618 953 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 BST2Q10589 180 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 PEX6Q13608 980 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 ZRSR1Q15695 479 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 GXYLT1Q4G148 440 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 KIRREL2Q6UWL6 708 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 CCDC91Q7Z6B0 441 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TMPRSS12Q86WS5 348 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 IQCF2Q8IXL9 164 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 TERB1Q8NA31 727 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 OR2T3Q8NH03 318 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 SLC35F5Q8WV83 523 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 VCPIP1Q96JH7 1222 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 USP28Q96RU2 1077 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 SEMA3CQ99985 751 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 BPIFA3Q9BQP9 254 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 IL1RAPL1Q9NZN1 696 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 INTS6Q9UL03 887 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 PCDHA7Q9UN72 937 aa4.93□□□□□ -1.62
NEK1-204ENST00000509912 ZFR2Q9UPR6 939 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.93□□□□□ -1.62
NEK1-204ENST00000509912 MAP1BP46821 2468 aaKnown RBP4.93□□□□□ -1.62
NEK1-204ENST00000509912 ATG2BQ96BY7 2078 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 A0A087WV48 116 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 NR3C1P04150 777 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 ZFP36P26651 326 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 CD82P27701 267 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 NMT1P30419 496 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 HCAR3P49019 387 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 SLC8A3P57103 927 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CCDC183Q5T5S1 534 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 KAZNQ674X7 775 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 LRRC8EQ6NSJ5 796 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 RHBDF2Q6PJF5 856 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 SETD3Q86TU7 594 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 LRRC49Q8IUZ0 686 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 RASSF8Q8NHQ8 419 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CTHRC1Q96CG8 243 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TSG101Q99816 390 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 PRMT1Q99873 361 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 THAP9Q9H5L6 903 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TMEM9BQ9NQ34 198 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TMLHEQ9NVH6 421 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 ARHGEF38Q9NXL2 777 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 CHORDC1Q9UHD1 332 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 DNPEPQ9ULA0 475 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CFAP54Q96N23 3096 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TPRP12270 2363 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 ACACBO00763 2458 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 GOLGA6L4A6NEF3 574 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 KCNU1A8MYU2 1149 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 PSMD9O00233 223 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 NUAK1O60285 661 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 ITGB3P05106 788 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TMIGD3P0DMS9 266 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 KRT13P13646 458 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 MSNP26038 577 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 CLCNKAP51800 687 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 ZNF33AQ06730 810 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CETN1Q12798 172 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TAF11Q15544 211 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CAMK4Q16566 473 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 NAIF1Q69YI7 327 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 CCNI2Q6ZMN8 369 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 GALNTL5Q7Z4T8 443 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 HPS6Q86YV9 775 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 FBXL13Q8NEE6 735 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TSTD1Q8NFU3 115 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 RPLP0P6Q8NHW5 317 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 IGSF8Q969P0 613 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 FKBP10Q96AY3 582 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 INTS12Q96CB8 462 aaKnown RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 ZDHHC12Q96GR4 267 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 PCED1BQ96HM7 432 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 FNBP1Q96RU3 617 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 BAG1Q99933 345 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 TSPY26PQ9H489 355 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CDCP1Q9H5V8 836 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 SYNCQ9H7C4 482 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 SNTG1Q9NSN8 517 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 RABL2AQ9UBK7 228 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 BLOC1S6Q9UL45 172 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 CETN3O15182 167 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 OR2C1O95371 312 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 GCNT3O95395 438 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 ZNF37AP17032 561 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 ACP1P24666 158 aa4.92□□□□□ -1.62
NEK1-204ENST00000509912 TLX1P31314 330 aaPredicted RBP4.92□□□□□ -1.62
NEK1-204ENST00000509912 UCNP55089 124 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms