RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PLCH2O75038 1416 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 HECW2Q9P2P5 1572 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 PCDH11XQ9BZA7 1347 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 PCDH11YQ9BZA8 1340 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 FANCAO15360 1455 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 POLR3AO14802 1390 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PNMA6EA0A0J9YXQ4 647 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0J9YYE9 177 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SMIM30A4D0T7 59 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF233A6NK53 670 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF98A6NK75 572 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 C2orf74A8MZ97 194 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TNPO2O14787 897 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SEC14L5O43304 696 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ARHGEF9O43307 516 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 LPXNO60711 386 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 GAS7O60861 476 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 KAT7O95251 611 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 KRT75O95678 551 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 DDAH2O95865 285 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TRBC1P01850 177 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ITGA5P08648 1049 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CYP21A2P08686 494 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 STSP08842 583 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PABPC1P11940 636 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ICAM2P13598 275 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 BRAFP15056 766 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 H2AFXP16104 143 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PTNP21246 168 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CST5P28325 142 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 AVPR2P30518 371 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 LCN1P31025 176 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ATP5C1P36542 298 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 FEN1P39748 380 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CRATP43155 626 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SLC1A6P48664 564 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 P2RY4P51582 365 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PRKAA2P54646 552 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PSMD4P55036 377 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 AP1S2P56377 157 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 RPS3AP61247 264 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ALDH6A1Q02252 535 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TGM3Q08188 693 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MERTKQ12866 999 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SCGB2A2Q13296 93 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 NAB1Q13506 487 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 IL18Q14116 193 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 GPR176Q14439 515 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CYTH1Q15438 398 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 BAK1Q16611 211 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SLC5A12Q1EHB4 618 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 HKDC1Q2TB90 917 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PGS1Q32NB8 556 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 UAP1L1Q3KQV9 507 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SV2CQ496J9 727 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MPPE1Q53F39 396 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 HIKESHIQ53FT3 197 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 FASTKD1Q53R41 847 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 C1orf146Q5VVC0 180 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 LIPNQ5VXI9 398 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 NAPEPLDQ6IQ20 393 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 IL20RBQ6UXL0 311 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ERN2Q76MJ5 926 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 USP37Q86T82 979 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 HIPK1Q86Z02 1210 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CNGA4Q8IV77 575 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TIGD4Q8IY51 512 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 SIX6OS1Q8N1H7 587 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ELMOD1Q8N336 334 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 GPR137CQ8N3F9 429 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ENDOVQ8N8Q3 282 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF248Q8NDW4 579 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 OR8J1Q8NGP2 316 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PSMA8Q8TAA3 256 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF596Q8TC21 504 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TCP10LQ8TDR4 215 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CHURC1Q8WUH1 139 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PYDC1Q8WXC3 89 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PSPC1Q8WXF1 523 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 KLHL6Q8WZ60 621 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MRPS27Q92552 414 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 LPGAT1Q92604 370 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF514Q96K75 400 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 C12orf66Q96MD2 445 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF578Q96N58 590 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF317Q96PQ6 595 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CGRRF1Q99675 332 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CTRCQ99895 268 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CNPY3Q9BT09 278 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PARD6GQ9BYG4 376 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 FTOQ9C0B1 505 aaKnown RBP eCLIP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 OR52A5Q9H2C5 316 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 OR51B6Q9H340 312 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 POFUT1Q9H488 388 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 DPEP3Q9H4B8 488 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MLXIPQ9HAP2 919 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PRMT8Q9NR22 394 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms