RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CDK16Q00536 496 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 NAA25Q14CX7 972 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 CCNG2Q16589 344 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 CCDC38Q502W7 563 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 YOD1Q5VVQ6 348 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 FAM198BQ6UWH4 519 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 DCUN1D3Q8IWE4 304 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 VPS50Q96JG6 964 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 DESI2Q9BSY9 194 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 NDC1Q9BTX1 674 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 PIH1D1Q9NWS0 290 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 BFARQ9NZS9 450 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 GNPTGQ9UJJ9 305 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 PRSS21Q9Y6M0 314 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
CCHCR1-227ENST00000508852 NBASA2RRP1 2371 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 TCRBV7S2A1N4TA0A589 114 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 GPC4O75487 556 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 ALPPP05187 535 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 CAPN1P07384 714 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 FOLR3P41439 243 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 PTGIRP43119 386 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 HSPA14Q0VDF9 509 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 BRD3Q15059 726 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 IGFBP7Q16270 282 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 KYNUQ16719 465 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 ZNF662Q6ZS27 426 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 CLEC1AQ8NC01 280 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 FOPNLQ96NB1 174 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 RUFY1Q96T51 708 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 IRAK4Q9NWZ3 460 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 IL1RAPL1Q9NZN1 696 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 IFT80Q9P2H3 777 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 ANKMY1Q9P2S6 941 aa13.12□□□□□ -0.31
CCHCR1-227ENST00000508852 CLEC18AA5D8T8 446 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 OR51F1A6NGY5 319 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 H3BMM5 538 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 NRDCO43847 1150 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 DNAJB5O75953 348 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 SLCO2B1O94956 709 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PVRP15151 417 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 NR1D1P20393 614 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PKLRP30613 574 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CCNFP41002 786 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 MEI1Q5TIA1 1274 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PRAMEF17Q5VTA0 474 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CPZQ66K79 652 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PTRHD1Q6GMV3 140 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 MRNIPQ6NTE8 343 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 DNAJC22Q8N4W6 341 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 ZBTB2Q8N680 514 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 SPC24Q8NBT2 197 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 TM9SF4Q92544 642 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 ZUFSPQ96AP4 578 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 RAD51AP1Q96B01 352 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PTERQ96BW5 349 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 SLC29A3Q9BZD2 475 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 SLC39A10Q9ULF5 831 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 VPS9D1Q9Y2B5 631 aa13.11□□□□□ -0.31
CCHCR1-227ENST00000508852 LRRK2Q5S007 2527 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 RP1L1Q8IWN7 2480 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 H3BMH7 237 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 CD3EAPO15446 510 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 OR1I1O60431 355 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 NDUFS3O75489 264 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 ALBP02768 609 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 ITGAXP20702 1163 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 CD9P21926 228 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 RPS3P23396 243 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 AOAHP28039 575 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 CCR7P32248 378 aa13.1□□□□□ -0.31
CCHCR1-227ENST00000508852 PTCHD3Q3KNS1 767 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms