RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PTPN20Q4JDL3 420 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 FILIP1LQ4L180 1135 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 DCAF6Q58WW2 860 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 WDR45BQ5MNZ6 344 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 C9orf64Q5T6V5 341 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 OTUD1Q5VV17 481 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 OR6B2Q6IFH4 312 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 MMS22LQ6ZRQ5 1243 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM183BPQ6ZVS7 135 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC26A9Q7LBE3 791 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ARCQ7LC44 396 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 PIP4P1Q86T03 277 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF677Q86XU0 584 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 CACUL1Q86Y37 369 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ZDHHC17Q8IUH5 632 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 RASGRP3Q8IV61 690 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 CCDC117Q8IWD4 279 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 APCDD1Q8J025 514 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 LGI2Q8N0V4 545 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 CARNMT1Q8N4J0 409 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 MINDY1Q8N5J2 469 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF366Q8N895 744 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 KDM1BQ8NB78 822 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 C1orf131Q8NDD1 294 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 DEFB124Q8NES8 71 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF397Q8NF99 534 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 NEK11Q8NG66 645 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 DNASE2BQ8WZ79 361 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 SYN2Q92777 582 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 IGSF8Q969P0 613 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 NT5C3BQ969T7 300 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 BTN2A3PQ96KV6 586 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 FYTTD1Q96QD9 318 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 WDR24Q96S15 920 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 PCDHB18PQ96TA0 734 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 EIF3CQ99613 913 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 EFHD1Q9BUP0 239 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 GTPBP2Q9BX10 602 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 GPR174Q9BXC1 333 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 QTRT1Q9BXR0 403 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 TSPY26PQ9H489 355 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 C6orf106Q9H6K1 298 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM207AQ9NSI2 230 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 TMEM51Q9NW97 253 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 SUN2Q9UH99 717 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 ANGPTL2Q9UKU9 493 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 LRCH1Q9Y2L9 728 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 EP300Q09472 2414 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 DOCK4Q8N1I0 1966 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 PLXND1Q9Y4D7 1925 aa3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 TNRC6BQ9UPQ9 1833 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-226ENST00000508635 MUC22E2RYF6 1773 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ITIH6Q6UXX5 1313 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CHD5Q8TDI0 1954 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PCDH15Q96QU1 1955 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SYNJ2BP-COX16A0A087WUM0 186 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 EDDM13A0A1B0GTR0 161 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SPAARA0A1B0GVQ0 90 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TARSL2A2RTX5 802 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 AQP12BA6NM10 295 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MEI4A8MW99 385 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TTC34A8MYJ7 566 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 C10orf142B7Z368 130 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 GOLGA6L19H0YKK7 550 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 I6L893 689 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 M0QYT0 321 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PES1O00541 588 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 GFPT2O94808 682 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MOCS3O95396 460 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ADCY5O95622 1261 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SEMA4FO95754 770 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 LSM8O95777 96 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SERPINC1P01008 464 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 DNTTP04053 509 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 IGHV4-34P06331 123 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 GZMAP12544 262 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 FBLP22087 321 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MMP8P22894 467 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CD27P26842 260 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC5A2P31639 672 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MATKP42679 507 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CXCR3P49682 368 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 NUMBP49757 651 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 DGKQP52824 942 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ATXN3P54252 364 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ST8SIA6P61647 398 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 RAE1P78406 368 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ZBED6P86452 979 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ECT2LQ008S8 904 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 BNC1Q01954 994 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PTP4A2Q12974 167 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 GRIK2Q13002 908 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TBX2Q13207 712 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 NME3Q13232 169 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MTA1Q13330 715 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC14A1Q13336 389 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 DNASE1L3Q13609 305 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms