RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SEMA6CQ9H3T2 930 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PPCSQ9HAB8 311 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 FANCEQ9HB96 536 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 C1GALT1Q9NS00 363 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 INTS7Q9NVH2 962 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
NUP54-207ENST00000508583 NINJ2Q9NZG7 142 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 OGFRQ9NZT2 677 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 DKK4Q9UBT3 224 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 SATB2Q9UPW6 733 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 LOXL2Q9Y4K0 774 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PSAT1Q9Y617 370 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 WDFY3Q8IZQ1 3526 aa8.87□□□□□ -0.99
NUP54-207ENST00000508583 PRAMEF33A0A0G2JMD5 474 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 EXOC1LA0A1B0GW35 172 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CCDC189A1A4V9 331 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 TRABD2BA6NFA1 517 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 B4E171 279 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 GFYI3L273 518 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 MYO1CO00159 1063 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 RASGRF2O14827 1237 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 KRT38O76015 456 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CCNDBP1O95273 360 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ZBTB11O95625 1053 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 ZNF37AP17032 561 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 POLR2CP19387 275 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 SAT1P21673 171 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CDH3P22223 829 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CD82P27701 267 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CRABP2P29373 138 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 PKLRP30613 574 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 TSPAN7P41732 249 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CDKN2DP55273 166 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 AP1S2P56377 157 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 RAB10P61026 200 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 UAP1Q16222 522 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 PAQR3Q6TCH7 311 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 UNQ6494/PRO21346Q6UXR6 183 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 RAPH1Q70E73 1250 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 UBE2R2Q712K3 238 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 ARHGAP22Q7Z5H3 698 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ADAMTSL2Q86TH1 951 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 BPHLQ86WA6 291 aaPredicted RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 FAM129CQ86XR2 697 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 OR9A1PQ8NGU1 263 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 HMGCLL1Q8TB92 370 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ASB11Q8WXH4 323 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 CCDC138Q96M89 665 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 PCBD2Q9H0N5 130 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ZNF768Q9H5H4 540 aaKnown RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
NUP54-207ENST00000508583 PARVBQ9HBI1 364 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ACTR10Q9NZ32 417 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 SLC17A6Q9P2U8 582 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 FETUBQ9UGM5 382 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 KLHL3Q9UH77 587 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 POMT2Q9UKY4 750 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ICKQ9UPZ9 632 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 MED16Q9Y2X0 877 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 ASPMQ8IZT6 3477 aa8.86□□□□□ -0.99
NUP54-207ENST00000508583 FRYQ5TBA9 3013 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CXorf49A8MYA2 514 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 ISM1B1AKI9 464 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 BTN3A1O00481 513 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 RIPK2O43353 540 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 KRT37O76014 449 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 MPOP05164 745 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 F7P08709 466 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 CHRM5P08912 532 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 NELFEP18615 380 aaKnown RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 CCND1P24385 295 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SLC26A3P40879 764 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 MSH2P43246 934 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 ABCG1P45844 678 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 BDKRB1P46663 353 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 GFERP55789 205 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 ATP6V0D1P61421 351 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 HSD11B2P80365 405 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 ACY1Q03154 408 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CFHR1Q03591 330 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 IL11RAQ14626 422 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SLC5A12Q1EHB4 618 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 DCAF12Q5T6F0 453 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 EMBQ6PCB8 327 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 SPESP1Q6UW49 350 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 CEACAM20Q6UY09 585 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 ZNF574Q6ZN55 896 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 FAM92BQ6ZTR7 304 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 FRA10AC1Q70Z53 315 aa8.85□□□□□ -0.99
NUP54-207ENST00000508583 PIWIL4Q7Z3Z4 852 aaKnown RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 TBC1D1Q86TI0 1168 aaPredicted RBP8.85□□□□□ -0.99
NUP54-207ENST00000508583 ADGRF3Q8IZF5 1079 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms