RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MSANTD2Q6P1R3 559 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 IL20RBQ6UXL0 311 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TMIGD1Q6UXZ0 262 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC30A10Q6XR72 485 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 PTF1AQ7RTS3 328 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CYP4Z1Q86W10 505 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LRRC56Q8IYG6 542 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GPR161Q8N6U8 529 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GPX8Q8TED1 209 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 RNF141Q8WVD5 230 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 OSCP1Q8WVF1 389 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 DYDC1Q8WWB3 177 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CACNG8Q8WXS5 425 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ADIPOR1Q96A54 375 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ULK4Q96C45 1275 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ERLEC1Q96DZ1 483 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LRR1Q96L50 414 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SENP8Q96LD8 212 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LURAP1Q96LR2 239 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 UBAC1Q9BSL1 405 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ALG12Q9BV10 488 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 UBE2OQ9C0C9 1292 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 DRC3Q9H069 523 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SMOC2Q9H3U7 446 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLITRK6Q9H5Y7 841 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM185BQ9H7F4 350 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LMAN1LQ9HAT1 526 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GCM1Q9NP62 436 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 C12orf4Q9NQ89 552 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TLR9Q9NR96 1032 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 NDUFA13Q9P0J0 144 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TBC1D24Q9ULP9 559 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ASTN2O75129 1339 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ABCA6Q8N139 1617 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 IFT172Q9UG01 1749 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 KIF1BO60333 1816 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 A0A1W2PPM1 405 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 MACROD2A1Z1Q3 448 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 H0YJX3 145 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 COCHO43405 550 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CCNT2O60583 730 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GPX5O75715 221 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GLCEO94923 617 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF202O95125 648 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SNAI1O95863 264 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 MBD3O95983 291 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 KRT6AP02538 564 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SNRPAP09012 282 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 PEPDP12955 493 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 S100A1P23297 94 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TIA1P31483 386 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC6A4P31645 630 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CABP4P57796 275 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 RPS15P62841 145 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TEKQ02763 1124 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 PPP1R8Q12972 351 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 STX5Q13190 355 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 PMS2P3Q13401 168 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 NOLC1Q14978 699 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC5A12Q1EHB4 618 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 PCID2Q5JVF3 399 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 KRT40Q6A162 431 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 KCTD1Q719H9 257 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TSPAN14Q8NG11 270 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LDAHQ9H6V9 325 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ACTL7AQ9Y615 435 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 FRMPD4Q14CM0 1322 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CFAP74Q9C0B2 1584 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 M0QYT0 321 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PGRMC1O00264 195 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 EIF3HO15372 352 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 JAK2O60674 1132 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CSO75390 466 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 BMP10O95393 424 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 HMGN1P05114 100 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ACO1P21399 889 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 DGKAP23743 735 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 BMP8BP34820 402 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 COPB1P53618 953 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 HSF2Q03933 536 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 E2F2Q14209 437 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 GCKRQ14397 625 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CSHL1Q14406 222 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 GSTA3Q16772 222 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PNLIPRP3Q17RR3 467 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CBWD6Q4V339 395 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PDCD4Q53EL6 469 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CBWD3Q5JTY5 395 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 RABGAP1LQ5R372 815 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 RGS7BPQ6MZT1 257 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PAOXQ6QHF9 649 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PRRT2Q7Z6L0 340 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 PIGWQ7Z7B1 504 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 CCDC60Q8IWA6 550 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 LIX1Q8N485 282 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 TBC1D19Q8N5T2 526 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 ARFGAP1Q8N6T3 406 aa7.31□□□□□ -1.24
PDGFRA-206ENST00000508170 MLKLQ8NB16 471 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms