RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	OR6C2	Q9NZP2	312 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FBXO5	Q9UKT4	447 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC39A10	Q9ULF5	831 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	BTRC	Q9Y297	605 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	HAUS5	O94927	633 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CCNYL3	P0C7X3	344 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PKLR	P30613	574 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	BDKRB1	P46663	353 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RAB28	P51157	221 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MPP1	Q00013	466 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ABHD18	Q0P651	414 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KYNU	Q16719	465 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ACSBG2	Q5FVE4	666 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	BPHL	Q86WA6	291 aa	Predicted RBP	13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TMEM126B	Q8IUX1	230 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPNS2	Q8IVW8	549 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM20C	Q8IXL6	584 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZNF501	Q96CX3	271 aa	Predicted RBP	13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CFAP36	Q96G28	342 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SNF8	Q96H20	258 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM167B	Q9BTA0	163 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PITPNM3	Q9BZ71	974 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FANCE	Q9HB96	536 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	IL17B	Q9UHF5	180 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CHMP2B	Q9UQN3	213 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SNX24	Q9Y343	169 aa		13.68	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KRT87P	A6NCN2	255 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TMEM150C	B9EJG8	249 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ERVH48-1	M5A8F1	160 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ATXN7	O15265	892 aa	Predicted RBP	13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SCRG1	O75711	98 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SEC31A	O94979	1220 aa	Known RBP	13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C1orf105	O95561	183 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TTC4	O95801	387 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CD9	P21926	228 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PEBP1	P30086	187 aa	Known RBP	13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	DLST	P36957	453 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ELK3	P41970	407 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	STAT5A	P42229	794 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C2orf54	Q08AI8	447 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MAP7	Q14244	749 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GRB7	Q14451	532 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CCSMST1	Q4G0I0	132 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPANXN3	Q5MJ09	141 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PRAMEF17	Q5VTA0	474 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZNF549	Q6P9A3	640 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LMNTD2	Q8IXW0	634 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LINC01555	Q8NAE3	123 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPATA4	Q8NEY3	305 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC39A7	Q92504	469 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RAD51AP1	Q96B01	352 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FCRL4	Q96PJ5	515 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC30A3	Q99726	388 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	NAT9	Q9BTE0	207 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PPAN	Q9NQ55	473 aa	Known RBP	13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CROT	Q9UKG9	612 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PADI1	Q9ULC6	663 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MRPS18B	Q9Y676	258 aa	Known RBP	13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPTB	P11277	2137 aa		13.67	□□□□□ -0.22
CCHCR1-222	ENST00000507459		A0A0J9YY10	115 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SMAP	O00193	183 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RASGRF2	O14827	1237 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	NKX2-8	O15522	239 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KATNA1	O75449	491 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MT-ND3	P03897	115 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PRB1	P04280	392 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PRKAR1A	P10644	381 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RPL21	P46778	160 aa	Known RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CARS	P49589	748 aa	Known RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CLCN7	P51798	805 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ARL4C	P56559	192 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CUL1	Q13616	776 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GBX1	Q14549	363 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KIR2DS3	Q14952	304 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	HIF1A	Q16665	826 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KLHL38	Q2WGJ6	581 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	DEFB110	Q30KQ9	67 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TTLL9	Q3SXZ7	439 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PCSK4	Q6UW60	755 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CDHR3	Q6ZTQ4	885 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ANKMY2	Q8IV38	441 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C19orf47	Q8N9M1	422 aa	Known RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	OR2L8	Q8NGY9	312 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	OR8K5	Q8NH50	307 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	OR1L3	Q8NH93	324 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FLVCR1-AS1	Q8TAF5	88 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TTC9	Q92623	222 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	N4BP2L2	Q92802	583 aa	Predicted RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	EXTL1	Q92935	676 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC45A3	Q96JT2	553 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GPR21	Q99679	349 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MENT	Q9BUN1	341 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	EFHD1	Q9BUP0	239 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC12A9	Q9BXP2	914 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	DPH5	Q9H2P9	285 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM60A	Q9NP50	221 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LHX9	Q9NQ69	397 aa		13.66	□□□□□ -0.22

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