RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KRT33BQ14525 404 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 C14orf28Q4W4Y0 310 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.78□□□□□ -0.2
RNF4-208ENST00000507247 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
RNF4-208ENST00000507247 ZYG11AQ6WRX3 759 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 PRR23CQ6ZRP0 262 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 ZNF761Q86XN6 746 aaPredicted RBP13.78□□□□□ -0.2
RNF4-208ENST00000507247 EID2Q8N6I1 236 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 ARL10Q8N8L6 244 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 PDPRQ8NCN5 879 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 OR52E1Q8NGJ3 308 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 RAD51AP1Q96B01 352 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 IL17FQ96PD4 163 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 EGFL8Q99944 293 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 TRIM54Q9BYV2 358 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 KIR3DX1Q9H7L2 352 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 ARL15Q9NXU5 204 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 STOX2Q9P2F5 926 aaPredicted RBP13.78□□□□□ -0.2
RNF4-208ENST00000507247 COPG2Q9UBF2 871 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 ICKQ9UPZ9 632 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 BTBD3Q9Y2F9 522 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 PCDHGB2Q9Y5G2 931 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 U3KQA8 63 aa13.78□□□□□ -0.2
RNF4-208ENST00000507247 LRRC14BA6NHZ5 514 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 TAPBPO15533 448 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 SIGLEC6O43699 453 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 SLC16A8O95907 504 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ANXA5P08758 320 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 HIST1H2AGP0C0S8 130 aaPredicted RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 ALPPL2P10696 532 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 MYL2P10916 166 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ERGP11308 486 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 CPA3P15088 417 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 CHN1P15882 459 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 HIST1H2ADP20671 130 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 COL5A1P20908 1838 aaPredicted RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 KCNA4P22459 653 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 NDUFS1P28331 727 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PKLRP30613 574 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ALDH3A1P30838 453 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 SERPINB4P48594 390 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ATP1A2P50993 1020 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 FASTKQ14296 549 aaKnown RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 GPR18Q14330 331 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PCM1Q15154 2024 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PFKFB4Q16877 469 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 TTC23LQ6PF05 361 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 DBX2Q6ZNG2 339 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 FBXO39Q8N4B4 442 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PTGR2Q8N8N7 351 aaPredicted RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 RDH11Q8TC12 318 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ZNF480Q8WV37 535 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 FBXL8Q96CD0 374 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 HIST1H2AHQ96KK5 128 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 APOLD1Q96LR9 279 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 CCDC138Q96M89 665 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 HIST1H2AJQ99878 128 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 H2AFJQ9BTM1 129 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 XKR8Q9H6D3 395 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 NKIRAS1Q9NYS0 192 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 MID2Q9UJV3 735 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PTBP2Q9UKA9 531 aaKnown RBP13.77□□□□□ -0.21
RNF4-208ENST00000507247 ASB1Q9Y576 335 aa13.77□□□□□ -0.21
RNF4-208ENST00000507247 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 SMIM24O75264 130 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 S100BP04271 92 aaPredicted RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 BPGMP07738 259 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 GFAPP14136 432 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 TAC1P20366 129 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 AGTR2P50052 363 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 ALDH18A1P54886 795 aaKnown RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 NFKB2Q00653 900 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 SETDB1Q15047 1291 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 CDKL4Q5MAI5 379 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 SULT1C3Q6IMI6 304 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 TMEM26Q6ZUK4 368 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 C10orf107Q8IVU9 208 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 LRRC56Q8IYG6 542 aaPredicted RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 FAM181AQ8N9Y4 354 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 PPFIBP2Q8ND30 876 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 TBC1D10AQ9BXI6 508 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 CNOT10Q9H9A5 744 aaKnown RBP13.76□□□□□ -0.21
RNF4-208ENST00000507247 TMEM9BQ9NQ34 198 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 ACSS2Q9NR19 701 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 WWOXQ9NZC7 414 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms