RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 KDM1BQ8NB78 822 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 FAM98AQ8NCA5 519 aaKnown RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 FBXL13Q8NEE6 735 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 ZNF548Q8NEK5 533 aaPredicted RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 ACTRT2Q8TDY3 377 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 DQX1Q8TE96 717 aaKnown RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 SGF29Q96ES7 293 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 LMLNQ96KR4 655 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 ZSCAN16Q9H4T2 348 aaPredicted RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 USP29Q9HBJ7 922 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 GPR35Q9HC97 309 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
PFDN1-202ENST00000507185 PRDM8Q9NQV8 689 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 TMEM160Q9NX00 188 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 RAB20Q9NX57 234 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 JKAMPQ9P055 326 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 PISDQ9UG56 409 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 SLC12A6Q9UHW9 1150 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 NAALADL1Q9UQQ1 740 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 MTMR6Q9Y217 621 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 ENTPD2Q9Y5L3 495 aa7.51□□□□□ -1.21
PFDN1-202ENST00000507185 CFAP46Q8IYW2 2715 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 COL5A1P20908 1838 aaPredicted RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PTPRQQ9UMZ3 2332 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CCDC187A0A096LP49 1063 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CASC3O15234 703 aaKnown RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 AQP9O43315 295 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 STX10O60499 249 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PPP6R2O75170 966 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 HAUS5O94927 633 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CALCAP01258 141 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 IGLV3-27P01718 113 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 EPB41P11171 864 aaKnown RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 VDRP11473 427 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SLC5A2P31639 672 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CYP4F2P78329 520 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CCDC15Q0P6D6 951 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CUL2Q13617 745 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SLC12A1Q13621 1099 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 ZNF284Q2VY69 593 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 LINC00303Q3SY05 128 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 RABGAP1LQ5R372 815 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 ZNF362Q5T0B9 420 aaPredicted RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PLAG1Q6DJT9 500 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PMF1Q6P1K2 205 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 MSANTD2Q6P1R3 559 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 TMEM270Q6UE05 265 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 GCNT7Q6ZNI0 430 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 TAC4Q86UU9 113 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PARGQ86W56 976 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PDSS2Q86YH6 399 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SLC44A2Q8IWA5 706 aaPredicted RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CCAR2Q8N163 923 aaKnown RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SLC22A18ASQ8N1D0 253 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 ADAMTS18Q8TE60 1221 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 PAGE5Q96GU1 130 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 RPRD1AQ96P16 312 aaPredicted RBP7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CCDC3Q9BQI4 270 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 STRADBQ9C0K7 418 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 EPS8L2Q9H6S3 715 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 NCKIPSDQ9NZQ3 722 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 FOXJ2Q9P0K8 574 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SEPT10Q9P0V9 454 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 XPR1Q9UBH6 696 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 NAV2Q8IVL1 2488 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 CABIN1Q9Y6J0 2220 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 SHROOM3Q8TF72 1996 aa7.5□□□□□ -1.21
PFDN1-202ENST00000507185 NUMA1Q14980 2115 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 LY6G6EA0A0G2JKS1 128 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 O00370 1275 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 PCDH17O14917 1159 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 DNPH1O43598 174 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 PEX1O43933 1283 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 ZFPL1O95159 310 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 PAK4O96013 591 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 ANXA6P08133 673 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 PIM1P11309 404 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 CHRNA3P32297 505 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 GTF2H1P32780 548 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 DCAF7P61962 342 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 SGCGQ13326 291 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 IGFBP7Q16270 282 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 PIP5KL1Q5T9C9 394 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 SP5Q6BEB4 398 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 FCRL6Q6DN72 434 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 RRAGAQ7L523 313 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 RAB11FIP2Q7L804 512 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 RBFAQ8N0V3 343 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 RYBPQ8N488 228 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 ATP6V0D2Q8N8Y2 350 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 Q8N9G6 341 aaPredicted RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 IRGQQ8WZA9 623 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 SMYD2Q9NRG4 433 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 STARD5Q9NSY2 213 aa7.49□□□□□ -1.21
PFDN1-202ENST00000507185 APOBEC3BQ9UH17 382 aaKnown RBP7.49□□□□□ -1.21
PFDN1-202ENST00000507185 CAPN11Q9UMQ6 739 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms