RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FAM174BQ3ZCQ3 159 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 NXNL2Q5VZ03 156 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 ATG9BQ674R7 924 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 ZCCHC8Q6NZY4 707 aaKnown RBP16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 PHACTR4Q8IZ21 702 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 ARRDC2Q8TBH0 407 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 UBE2FQ969M7 185 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 DEPDC7Q96QD5 511 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 OSMRQ99650 979 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 TMEM246Q9BRR3 403 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 RASSF1Q9NS23 344 aa16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 CRNNQ9UBG3 495 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-211ENST00000506690 UBA6A0AVT1 1052 aaPredicted RBP16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 CAPN5O15484 640 aaPredicted RBP16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 PCDHGA12O60330 932 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 SEMA3DO95025 777 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 FMO4P31512 558 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GRK5P34947 590 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GPR50Q13585 617 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 PTGR1Q14914 329 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 TBCEQ15813 527 aaPredicted RBP16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 KIAA1614Q5VZ46 1190 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GCNT7Q6ZNI0 430 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 SLC46A3Q7Z3Q1 461 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 C14orf80Q86SX3 495 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GALNT12Q8IXK2 581 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 KBTBD8Q8NFY9 601 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 OR10Q1Q8NGQ4 319 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GDF15Q99988 308 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 PRDM8Q9NQV8 689 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 ADPRHL2Q9NX46 363 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 SNX6Q9UNH7 406 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 GRIP1Q9Y3R0 1128 aa16.73■□□□□ 0.27
SQSTM1-211ENST00000506690 PNMA8CA0A1B0GUJ8 204 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 WASH4PA8MWX3 477 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 E9PQ18 207 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 TSPAN12O95859 305 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 RPLP0P05388 317 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 CA8P35219 290 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 GALK2Q01415 458 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 SIGIRRQ6IA17 410 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 OR2T5Q6IEZ7 315 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 C10orf111Q8N326 155 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 NKAPQ8N5F7 415 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 OR2T29Q8NH02 315 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 BLOC1S5Q8TDH9 187 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 SENP8Q96LD8 212 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 ZBTB18Q99592 522 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 GPR21Q99679 349 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 PITX2Q99697 317 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 C1orf109Q9NX04 203 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 ABCG2Q9UNQ0 655 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 A0A1W2PQ67 120 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 ARVCFO00192 962 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 MUSKO15146 869 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 LHX1P48742 406 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 ARHGDIAP52565 204 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 CSNK2BP67870 215 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 GTDC1Q4AE62 458 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 VN1R5Q7Z5H4 357 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 CCDC190Q86UF4 302 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 TEX26Q8N6G2 289 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 DNASE1L2Q92874 299 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 CCL27Q9Y4X3 112 aa16.72■□□□□ 0.27
SQSTM1-211ENST00000506690 LOC110117498-PIK3R3F6TDL0 507 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 H3BQ06 376 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 AP3D1O14617 1153 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 PGRP06401 933 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 CREMQ03060 361 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 STARD3Q14849 445 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 ABRAXAS2Q15018 415 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 LRRC26Q2I0M4 334 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SPANXN4Q5MJ08 99 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 UBXN11Q5T124 520 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 RFPL4BQ6ZWI9 263 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 GPSM1Q86YR5 675 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 UMODL1-AS1Q8N2C9 162 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 PIK3R3Q92569 461 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 HMCESQ96FZ2 354 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 COPS4Q9BT78 406 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 CCDC32Q9BV29 185 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SLA2Q9H6Q3 261 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SLC6A13Q9NSD5 602 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 TRMT13Q9NUP7 481 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 TBC1D24Q9ULP9 559 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 PIN4Q9Y237 131 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 BOLA1Q9Y3E2 137 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 LYVE1Q9Y5Y7 322 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 HS3ST4Q9Y661 456 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 PLXNB2O15031 1838 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 A0A096LPI6 279 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 A0A0U1RQS6 177 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms