RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 INPP5DQ92835 1189 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 TAAR9Q96RI9 348 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 CTRCQ99895 268 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 MCMBPQ9BTE3 642 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 ACSL6Q9UKU0 697 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 PCDHGA3Q9Y5H0 932 aa17.67■□□□□ 0.42
PDLIM7-216ENST00000506537 SDK2Q58EX2 2172 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 A0A087WV48 116 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 MATN2O00339 956 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 PSIP1O75475 530 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 UGT2B7P16662 529 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 MCM3P25205 808 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 PRDX3P30048 256 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 RAB28P51157 221 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 COL9A2Q14055 689 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 KCNAB1Q14722 419 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 HECTD2Q5U5R9 776 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 CYHR1Q6ZMK1 362 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 NEK10Q6ZWH5 1172 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 STRA8Q7Z7C7 330 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 TRIM73Q86UV7 250 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 SLC26A11Q86WA9 606 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 ZC3HC1Q86WB0 502 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 RASGRP3Q8IV61 690 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 GPATCH11Q8N954 259 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 DENND1AQ8TEH3 1009 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 NAF1Q96HR8 494 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 OLFM1Q99784 485 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 DDA1Q9BW61 102 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 PITPNM3Q9BZ71 974 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 B3GNT4Q9C0J1 378 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 LRRC4CQ9HCJ2 640 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 FBXO8Q9NRD0 319 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 OR6C2Q9NZP2 312 aa17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 TRMT6Q9UJA5 497 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 CORO1CQ9ULV4 474 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-216ENST00000506537 AHCTF1Q8WYP5 2266 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 PIPSLA2A3N6 862 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 FAM159BA6NKW6 160 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 C2orf74A8MZ97 194 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 RASGRF2O14827 1237 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 ENO3P13929 434 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 PVRP15151 417 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 FOLR1P15328 257 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 CD9P21926 228 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 FDXRP22570 491 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 CCNFP41002 786 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 RAB15P59190 212 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 UBAP2Q5T6F2 1119 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 SPESP1Q6UW49 350 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 C3orf62Q6ZUJ4 267 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 PIWIL4Q7Z3Z4 852 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 CARFQ8N187 725 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 ZNF248Q8NDW4 579 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 FOPNLQ96NB1 174 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 OR2A14Q96R47 310 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 L2HGDHQ9H9P8 463 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 C1GALT1Q9NS00 363 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 TAS2R13Q9NYV9 303 aa17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 SNRNP200O75643 2136 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-216ENST00000506537 SLC9B1P1A6NJY1 282 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 KDM1AO60341 852 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 ZBTB11O95625 1053 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 TSPAN12O95859 305 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 GSTA2P09210 222 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 EBLN1P0CF75 366 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 MPC1LP0DKB6 136 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 CBSLP0DN79 551 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 ST6GAL1P15907 406 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 CDH3P22223 829 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 ITPKBP27987 946 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 CBSP35520 551 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 FOXM1Q08050 763 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 DCAF12Q5T6F0 453 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 PAQR3Q6TCH7 311 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 CYS1Q717R9 158 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 TAX1BP1Q86VP1 789 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 KMT5CQ86Y97 462 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 SPACA3Q8IXA5 215 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 D2HGDHQ8N465 521 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 C2orf73Q8N5S3 287 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 OR2L8Q8NGY9 312 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 KCNE4Q8WWG9 221 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 ASB11Q8WXH4 323 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 RAD51AP1Q96B01 352 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 OR6C1Q96RD1 312 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM129AQ9BZQ8 928 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 KLHL25Q9H0H3 589 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 BTRCQ9Y297 605 aa17.64■□□□□ 0.41
PDLIM7-216ENST00000506537 MYO1CO00159 1063 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 EIF3FO00303 357 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 HSD11B2P80365 405 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 CLN3Q13286 438 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 TMEM164Q5U3C3 297 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM45BPQ6NSW5 357 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 UGT3A1Q6NUS8 523 aa17.63■□□□□ 0.41
PDLIM7-216ENST00000506537 FAM20CQ8IXL6 584 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms