RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ADAMTS20P59510 1910 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 CACNA1BQ00975 2339 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 RASGRF2O14827 1237 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 KLK10O43240 276 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 MATN4O95460 622 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 C1orf105O95561 183 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 CD9P21926 228 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 PRDX3P30048 256 aaKnown RBP16.16■□□□□ 0.18
SNCA-209ENST00000506244 RGS4P49798 205 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 TUBB3Q13509 450 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 KLHL38Q2WGJ6 581 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 ACSBG2Q5FVE4 666 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 FAM45BPQ6NSW5 357 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 CCDC25Q86WR0 208 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 D2HGDHQ8N465 521 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 OR8K5Q8NH50 307 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 FAM45AQ8TCE6 357 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 CD200R1Q8TD46 325 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 SEC14L1Q92503 715 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 OR6C1Q96RD1 312 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 NDNQ99608 321 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 LRRC1Q9BTT6 524 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 SYTL2Q9HCH5 934 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 TXNDC16Q9P2K2 825 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 MTRF1LQ9UGC7 380 aaKnown RBP16.16■□□□□ 0.18
SNCA-209ENST00000506244 PLAGL1Q9UM63 463 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 MED16Q9Y2X0 877 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 DMXL2Q8TDJ6 3036 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 PKD1L2Q7Z442 2459 aa16.16■□□□□ 0.18
SNCA-209ENST00000506244 ZNF839A8K0R7 811 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 SPAG6O75602 509 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 AHSGP02765 367 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 F7P08709 466 aaPredicted RBP16.15■□□□□ 0.18
SNCA-209ENST00000506244 MPC1LP0DKB6 136 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 UGT2B7P16662 529 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 BDKRB1P46663 353 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 TMPRSS3P57727 454 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 GUCY2DQ02846 1103 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 TLE3Q04726 772 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 SLC5A12Q1EHB4 618 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 PPP1R3BQ86XI6 285 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 GPATCH11Q8N954 259 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 OR2L8Q8NGY9 312 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 GIMAP7Q8NHV1 300 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 PMEPA1Q969W9 287 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 CTRCQ99895 268 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 TSPYL1Q9H0U9 437 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 MOCS1Q9NZB8 636 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 LNPEPQ9UIQ6 1025 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 TSR3Q9UJK0 312 aaKnown RBP16.15■□□□□ 0.18
SNCA-209ENST00000506244 RARRES3Q9UL19 164 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 NFS1Q9Y697 457 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 AHCTF1Q8WYP5 2266 aa16.15■□□□□ 0.18
SNCA-209ENST00000506244 A0A0J9YY10 115 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 ESYT3A0FGR9 886 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 ISM1B1AKI9 464 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 PSIP1O75475 530 aaKnown RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 FKBP9O95302 570 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 MSL3P1P0C860 447 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 FGF5P12034 268 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 MAP4P27816 1152 aaKnown RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 TUBB4BP68371 445 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 SH3BP2P78314 561 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 CLN3Q13286 438 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 PDAP1Q13442 181 aaKnown RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 CUL1Q13616 776 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNCA-209ENST00000506244 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 ZFAND4Q86XD8 727 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 RASGRP3Q8IV61 690 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 FBXO15Q8NCQ5 510 aaPredicted RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 HMGCLL1Q8TB92 370 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 FCRL4Q96PJ5 515 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 ULBP3Q9BZM4 244 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 APMAPQ9HDC9 416 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 FGF21Q9NSA1 209 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 INTS7Q9NVH2 962 aaKnown RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 SLC17A6Q9P2U8 582 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 GALPQ9UBC7 116 aa16.14■□□□□ 0.17
SNCA-209ENST00000506244 RUVBL2Q9Y230 463 aaKnown RBP16.14■□□□□ 0.17
SNCA-209ENST00000506244 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 SLC9B1P1A6NJY1 282 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 STK17BO94768 372 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 EBLN1P0CF75 366 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 TPBGLP0DKB5 382 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 GABRB3P28472 473 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 STX2P32856 288 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 HSD17B2P37059 387 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 SP140Q13342 867 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 MAP7Q14244 749 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 GRB7Q14451 532 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 NAA25Q14CX7 972 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 MANEAQ5SRI9 462 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 RBM20Q5T481 1227 aaKnown RBP16.13■□□□□ 0.17
SNCA-209ENST00000506244 CYS1Q717R9 158 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 STRA8Q7Z7C7 330 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 DTX1Q86Y01 620 aa16.13■□□□□ 0.17
SNCA-209ENST00000506244 CPNE9Q8IYJ1 553 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms