RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DANCRP0C864 163 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ITGAMP11215 1152 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RALAP11233 206 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 EZRP15311 586 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CSF2RAP15509 400 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CD58P19256 250 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 NCF2P19878 526 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CDH3P22223 829 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 MPZP25189 248 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 HIBADHP31937 336 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 EIF2S3P41091 472 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 LHX1P48742 406 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 GMPSP49915 693 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 HTR6P50406 440 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 METAP2P50579 478 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ATP5IP56385 69 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 UBE2HP62256 183 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CFHR1Q03591 330 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ARHGAP1Q07960 439 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CUL3Q13618 768 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 STXBP2Q15833 593 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PDK4Q16654 411 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 TXNRD1Q16881 649 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RSPO4Q2I0M5 234 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 VMACQ2NL98 169 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 EIF2S3LQ2VIR3 472 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM174BQ3ZCQ3 159 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 C9orf50Q5SZB4 431 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 DCST1Q5T197 706 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CCNYL2Q5T2Q4 361 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 GCNT6Q5T4J0 391 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 NAIF1Q69YI7 327 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PM20D1Q6GTS8 502 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 NCAPH2Q6IBW4 605 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 DLEU7Q6UYE1 221 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 TPRG1Q6ZUI0 275 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ARHGAP22Q7Z5H3 698 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 BCDIN3DQ7Z5W3 292 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 TFAP2DQ7Z6R9 452 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ATG4DQ86TL0 474 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ASPGQ86U10 573 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZC3HC1Q86WB0 502 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 NRROSQ86YC3 692 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZDHHC21Q8IVQ6 265 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RYBPQ8N488 228 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PDCL2Q8N4E4 241 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM133AQ8N9E0 248 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 VANGL1Q8TAA9 524 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF398Q8TD17 642 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SLC20A1Q8WUM9 679 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PROX1Q92786 737 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RFKQ969G6 155 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ERGIC1Q969X5 290 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 KAZALD1Q96I82 304 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF582Q96NG8 517 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 COQ7Q99807 217 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 C17orf62Q9BQA9 187 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 POLR3CQ9BUI4 534 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 FICDQ9BVA6 458 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PNNQ9H307 717 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 TMEM245Q9H330 911 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 FOXP1Q9H334 677 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 UBQLN3Q9H347 655 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 MAGEF1Q9HAY2 307 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 TMEM74BQ9NUR3 256 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PCMTD2Q9NV79 361 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PANK4Q9NVE7 773 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RAB20Q9NX57 234 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CNOT2Q9NZN8 540 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 KLHL8Q9P2G9 620 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 KLHL13Q9P2N7 655 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PSME2Q9UL46 239 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ABT1Q9ULW3 272 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SH3GLB1Q9Y371 365 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 GRIP1Q9Y3R0 1128 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PIK3R4Q99570 1358 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 ABCC4O15439 1325 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 KIF16BQ96L93 1317 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 GAGE12BA1L429 117 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 GOLGA8OA6NCC3 632 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 GAGE12HA6NDE8 117 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 LACTBL1A8MY62 500 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 GOLGA8NF8WBI6 632 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 RHODO00212 210 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 HSPB6O14558 160 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 XPO1O14980 1071 aaKnown RBP3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 SLC22A2O15244 555 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 MED7O43513 233 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 DCXO43602 365 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF217O75362 1048 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 FLOT1O75955 427 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 MFN2O95140 757 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 NDUFB4O95168 129 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 GSRP00390 522 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 IL1BP01584 269 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 LIPFP07098 398 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 CHRNGP07510 517 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 ASNSP08243 561 aa3.51□□□□□ -1.85
HMGB1P22-201ENST00000505315 MMP3P08254 477 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms