RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DPYSL3Q14195 570 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 GALNT3Q14435 633 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 PAFAH1B3Q15102 231 aaKnown RBP5.78□□□□□ -1.48
GYPB-204ENST00000504951 SEPT7Q16181 437 aaKnown RBP5.78□□□□□ -1.48
GYPB-204ENST00000504951 TUBB8Q3ZCM7 444 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 KHDC1Q4VXA5 237 aaKnown RBP5.78□□□□□ -1.48
GYPB-204ENST00000504951 ATG9BQ674R7 924 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 FBXO38Q6PIJ6 1188 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CRTC3Q6UUV7 619 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CDHR3Q6ZTQ4 885 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SPPL2CQ8IUH8 684 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 PQLC3Q8N755 202 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CNTD1Q8N815 330 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 NIPA2Q8N8Q9 360 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 CATSPER1Q8NEC5 780 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 DDHD1Q8NEL9 900 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 ACVR1CQ8NER5 493 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 LPCAT1Q8NF37 534 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 OR11G2Q8NGC1 345 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 EDARADDQ8WWZ3 215 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 DLG3Q92796 817 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 MBD6Q96DN6 1003 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 TRIB3Q96RU7 358 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 C19orf43Q9BQ61 176 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 VKORC1Q9BQB6 163 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SLC7A5P2Q9GIP4 190 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 TRABDQ9H4I3 376 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SLC22A11Q9NSA0 550 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 RBM22Q9NW64 420 aaKnown RBP eCLIP5.78□□□□□ -1.48
GYPB-204ENST00000504951 ANAPC7Q9UJX3 599 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 TTLL3Q9Y4R7 772 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 HS3ST3B1Q9Y662 390 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
GYPB-204ENST00000504951 NSD1Q96L73 2696 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 GSAPA4D1B5 854 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 C2orf74A8MZ97 194 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 KCNK1O00180 336 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 PRAMEF2O60811 474 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MTX2O75431 263 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 OR2B3O76000 313 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 RASAL1O95294 804 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 BMP10O95393 424 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 EPOP01588 193 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CYP1A2P05177 515 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MYBL1P10243 752 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 POLR2CP19387 275 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 HLA-DPA1P20036 260 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MST1P26927 711 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 GJC1P36383 396 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CARSP49589 748 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 PPP2R2AP63151 447 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 LTBQ06643 244 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 ZBTB17Q13105 803 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 PIGHQ14442 188 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 KRT81Q14533 505 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 NR1I3Q14994 352 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CDSNQ15517 529 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 NKG7Q16617 165 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 ATP13A5Q4VNC0 1218 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CCDC183Q5T5S1 534 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CES4AQ5XG92 561 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 ALS2CLQ60I27 953 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MEX3BQ6ZN04 569 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 FAM83HQ6ZRV2 1179 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 CAMKMTQ7Z624 323 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 TRAPPC5Q8IUR0 188 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 DMRTC2Q8IXT2 367 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 DNAJC22Q8N4W6 341 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 OR2L2Q8NH16 312 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 ARSGQ96EG1 525 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 THOC3Q96J01 351 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 MAGEB10Q96LZ2 347 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 PPM1MQ96MI6 270 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 TTC25Q96NG3 672 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 ALPK1Q96QP1 1244 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 DMRTA2Q96SC8 542 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 TMEM121Q9BTD3 319 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MVB12BQ9H7P6 319 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MRPL47Q9HD33 250 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 SMOXQ9NWM0 555 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 NOP53Q9NZM5 478 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 SHOC2Q9UQ13 582 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 MRPS2Q9Y399 296 aaKnown RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 MAP1AP78559 2803 aaPredicted RBP5.77□□□□□ -1.49
GYPB-204ENST00000504951 JMJD1CQ15652 2540 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 COL6A5A8TX70 2615 aa5.77□□□□□ -1.49
GYPB-204ENST00000504951 IGLV3-12A0A075B6K2 115 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 ASPDHA6ND91 283 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 AGAP14A8MT82 685 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 FAM171A2A8MVW0 826 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 BTN3A3O00478 584 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 GNB5O14775 395 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 AURKAO14965 403 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 GPR39O43194 453 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 PRAMEF1O95521 474 aa5.76□□□□□ -1.49
GYPB-204ENST00000504951 SLC4A1P02730 911 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms