RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 RPL10P27635 214 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 CAPGP40121 348 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 HNMTP50135 292 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 CLDN8P56748 225 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 POLR2LP62875 67 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 PHC1P78364 1004 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 SP140Q13342 867 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 BOP1Q14137 746 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 PRAMEF9Q5VWM5 478 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 USP51Q70EK9 711 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 L3MBTL4Q8NA19 623 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 OR10A6Q8NH74 314 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 ADAMTS16Q8TE57 1224 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 IRF7Q92985 503 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 MTFMTQ96DP5 389 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 SH3GL3Q99963 347 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 CARS2Q9HA77 564 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 TUBA8Q9NY65 449 aaPredicted RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 PKD2L2Q9NZM6 624 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 DLGAP4Q9Y2H0 992 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 H3BSA7 217 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 TYRP14679 529 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 ZNF30P17039 623 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 CDH15P55291 814 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 RPS14P62263 151 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 DYNC1I2Q13409 638 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 PTCHD3Q3KNS1 767 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 TMEM215Q68D42 235 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 BRAT1Q6PJG6 821 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 DHRSXQ8N5I4 330 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 TNIP2Q8NFZ5 429 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 SELENOMQ8WWX9 145 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 MYLIPQ8WY64 445 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 CLP1Q92989 425 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 TMIGD2Q96BF3 282 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 FBXL20Q96IG2 436 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 VPS50Q96JG6 964 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 P2RY13Q9BPV8 354 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
MATR3-233ENST00000504203 LINC00597Q9H2U6 94 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 SERHLQ9NQF3 203 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 SNX6Q9UNH7 406 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 FADS3Q9Y5Q0 445 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
MATR3-233ENST00000504203 MTCL1Q9Y4B5 1905 aaKnown RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 CLIC3O95833 236 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 HOXB9P17482 250 aaPredicted RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 NFKBIAP25963 317 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 DCDC1P59894 354 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 ERVFC1P60507 584 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 HTRA4P83105 476 aaPredicted RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 HTRA3P83110 453 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 DMC1Q14565 340 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 TEAD2Q15562 447 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 FAM98BQ52LJ0 330 aaKnown RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 LRIF1Q5T3J3 769 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 FAM86B1Q8N7N1 296 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 LEMD2Q8NC56 503 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 DNAJB8Q8NHS0 232 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 FRS2Q8WU20 508 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 CYGBQ8WWM9 190 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 MPP4Q96JB8 637 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 HHIPQ96QV1 700 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 OR52E6Q96RD3 313 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 THUMPD3Q9BV44 507 aaKnown RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.71□□□□□ -0.37
MATR3-233ENST00000504203 MAN2B2Q9Y2E5 1009 aa12.71□□□□□ -0.37
MATR3-233ENST00000504203 SERTM1A2A2V5 107 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 CCDC160A6NGH7 325 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 H0Y858 1186 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 DEAF1O75398 565 aaPredicted RBP12.7□□□□□ -0.38
MATR3-233ENST00000504203 MTX2O75431 263 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 SNAP29O95721 258 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 PRPS2P11908 318 aa12.7□□□□□ -0.38
MATR3-233ENST00000504203 DDX6P26196 483 aaKnown RBP eCLIP12.7□□□□□ -0.383e-13■□□□□ 10.8
MATR3-233ENST00000504203 PTPN6P29350 595 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms