RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 IFNA17P01571 189 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 HNRNPA1P09651 372 aaKnown RBP eCLIP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ETS1P14921 441 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CYP2F1P24903 491 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TGFBR2P37173 567 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 RBP2P50120 134 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF81P51508 661 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 PRKAA2P54646 552 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 MAMLD1Q13495 774 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 MFSD13AQ14CX5 517 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 AANATQ16613 207 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ZSWIM7Q19AV6 140 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ARHGAP17Q68EM7 881 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ILDR2Q71H61 639 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 OR4A15Q8NGL6 344 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CHPT1Q8WUD6 406 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 MED8Q96G25 268 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 NECAB3Q96P71 396 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 METTL22Q9BUU2 404 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TLR10Q9BXR5 811 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ISCUQ9H1K1 167 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 PPIL3Q9H2H8 161 aaKnown RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 C11orf49Q9H6J7 331 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 PEX16Q9Y5Y5 336 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 GRIN2DO15399 1336 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ANKUB1A6NFN9 424 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 MATN3O15232 486 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PTP4A3O75365 173 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 YBEYP58557 167 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SNRPD2P62316 118 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PSPHP78330 225 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SIM1P81133 766 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 BST2Q10589 180 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 DMP1Q13316 513 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 MEA1Q16626 185 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 HSDL1Q3SXM5 330 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ZC3H14Q6PJT7 736 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 GK5Q6ZS86 529 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ADIPOR2Q86V24 386 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CCDC60Q8IWA6 550 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 KIAA0319LQ8IZA0 1049 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CCDC24Q8N4L8 307 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 OR13C2Q8NGS9 318 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 HTR3CQ8WXA8 447 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 LRRC46Q96FV0 321 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ZC3H12CQ9C0D7 883 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 NMUR2Q9GZQ4 415 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CARS2Q9HA77 564 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CXorf21Q9HAI6 301 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 BRF2Q9HAW0 419 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 TCF7L1Q9HCS4 588 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SRA1Q9HD15 236 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SIRT7Q9NRC8 400 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CCM2LQ9NUG4 571 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 EEF2KO00418 725 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 FMO6PO60774 539 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CSNK2A1P68400 391 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CEBPEQ15744 281 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 NTRK2Q16620 822 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 GUK1Q16774 197 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CCNJQ5T5M9 372 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PM20D1Q6GTS8 502 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CSNK2A3Q8NEV1 391 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 OR9Q1Q8NGQ5 310 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PPP1R35Q8TAP8 253 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PXYLP1Q8TE99 480 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PCNPQ8WW12 178 aaKnown RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 IP6K1Q92551 441 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 PTERQ96BW5 349 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 DCAF5Q96JK2 942 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM74Q96NL1 305 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 RCOR3Q9P2K3 495 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SEC14L3Q9UDX4 400 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CDH9Q9ULB4 789 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 FLT4P35916 1363 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SERPINE3A8MV23 424 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 KRBOX1C9JBD0 128 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CLIC2O15247 247 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 FZD6O60353 706 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SLITRK3O94933 977 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 EOMESO95936 686 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ERCC2P18074 760 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ACTR1BP42025 376 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 SLC1A4P43007 532 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 GCLMP48507 274 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CDH12P55289 794 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 NRG1Q02297 640 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 MAB21L1Q13394 359 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 HLFQ16534 295 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 CTXN3Q4LDR2 81 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM35AQ53FP2 167 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 FBXO47Q5MNV8 452 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 BSPRYQ5W0U4 402 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF529Q6P280 563 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 FAHD2BQ6P2I3 314 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-204ENST00000504131 TFAP2DQ7Z6R9 452 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 KLBQ86Z14 1044 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 TGIF2LXQ8IUE1 241 aa6.14□□□□□ -1.43
CLCN3-204ENST00000504131 EID3Q8N140 333 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms