RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 NUP160Q12769 1436 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 KIF13AQ9H1H9 1805 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 TTC3P53804 2025 aa5.04□□□□□ -1.6
HMGB1P3-201ENST00000502802 ERICH3Q5RHP9 1530 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 TEX13DA0A0J9YY54 714 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 A0A1W2PPW3 197 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 WDR91A4D1P6 747 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 SDR42E2A6NKP2 422 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 DUXAA6NLW8 204 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 WDR1O75083 606 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 LDB3O75112 727 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 WDPCPO95876 746 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 PRSS2P07478 247 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 MYL6BP14649 208 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 CSF2RAP15509 400 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 EPCAMP16422 314 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 PTGER4P35408 488 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 USP8P40818 1118 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ABCG1P45844 678 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 KHKP50053 298 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 MMP15P51511 669 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 MFAP3P55082 362 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 MAT1AQ00266 395 aaKnown RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 SLC20A2Q08357 652 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 TEFQ10587 303 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 GTF2H2Q13888 395 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 LASP1Q14847 261 aaKnown RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 NFATC4Q14934 902 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 HLFQ16534 295 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 FUT11Q495W5 492 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 LBHQ53QV2 105 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 NDUFAF5Q5TEU4 345 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 GTF2H2CQ6P1K8 395 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 NHLRC1Q6VVB1 395 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ASB18Q6ZVZ8 466 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ARHGAP22Q7Z5H3 698 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 NRARPQ7Z6K4 114 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 FOXP4Q8IVH2 680 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ODF3L1Q8IXM7 274 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 NDUFAF2Q8N183 169 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 CPSF7Q8N684 471 aaKnown RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 L3MBTL4Q8NA19 623 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 VANGL1Q8TAA9 524 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPATA20Q8TB22 786 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 RNF128Q8TEB7 428 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ASB5Q8WWX0 329 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 RIT1Q92963 219 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 OXNAD1Q96HP4 312 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 ATP6V0BQ99437 205 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 RAD9AQ99638 391 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 CACNG6Q9BXT2 260 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 SERINC1Q9NRX5 453 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 IARS2Q9NSE4 1012 aaKnown RBP5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 B3GAT1Q9P2W7 334 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 LRWD1Q9UFC0 647 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 KCNS2Q9ULS6 477 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 FHAD1B1AJZ9 1412 aa5.03□□□□□ -1.6
HMGB1P3-201ENST00000502802 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PRR32B1ATL7 298 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 TOMM40O96008 361 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 TFAP2AP05549 437 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 HMOX1P09601 288 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 UROSP10746 265 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 LBPP18428 481 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PSMB4P28070 264 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 SLC6A6P31641 620 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 ARRB2P32121 409 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 FRKP42685 505 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 ARCN1P48444 511 aaKnown RBP5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 MLLT10P55197 1068 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 EEF1A1P68104 462 aaKnown RBP5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 CBX3Q13185 183 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 VEZF1Q14119 521 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 MCMDC2Q4G0Z9 681 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF789Q5FWF6 425 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 EEF1A1P5Q5VTE0 462 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 OR7E24Q6IFN5 339 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 C11orf63Q6NUN7 778 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PLXDC2Q6UX71 529 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 GFRALQ6UXV0 394 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 KCTD9Q7L273 389 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PHLDB2Q86SQ0 1253 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 TMEM219Q86XT9 240 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 SMRP1Q8NCR6 262 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PI4K2AQ9BTU6 479 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 C1QTNF7Q9BXJ2 289 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 VN1R1Q9GZP7 353 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 TRPC7Q9HCX4 862 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 TXNDC16Q9P2K2 825 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 PCDHGA1Q9Y5H4 931 aa5.02□□□□□ -1.61
HMGB1P3-201ENST00000502802 ACEP12821 1306 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 PCDH11YQ9BZA8 1340 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 A0A0G2JNG1 304 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 A0A0G2JPF8 293 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 A0A1W2PPK0 400 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 C5orf60A6NFR6 353 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 HNRNPCL3B7ZW38 293 aa5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 RTCAO00442 366 aaKnown RBP5.01□□□□□ -1.61
HMGB1P3-201ENST00000502802 PPIP5K2O43314 1243 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms