RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PCDHGA12O60330 932 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 OR7A10O76100 309 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 RHOBTB1O94844 696 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SLITRK5O94991 958 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MLYCDO95822 493 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MOCS2O96007 188 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 HLA-DQB2P05538 268 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 POLR2CP19387 275 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 GEMP55040 296 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 MFSD10Q14728 455 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 CACHD1Q5VU97 1274 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 METTL6Q8TCB7 284 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF675Q8TD23 568 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 UTP15Q8TED0 518 aaKnown RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 NPY6RQ99463 290 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 TTPALQ9BTX7 342 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 GPR83Q9NYM4 423 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 IKZF3Q9UKT9 509 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
GAPVD1-220ENST00000497580 YJEFN3A6XGL0 299 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 CDC7O00311 574 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 BTN3A1O00481 513 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 CREG1O75629 220 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 TPPPO94811 219 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 PAPSS2O95340 614 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 CNPP09543 421 aaKnown RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 RFX2P48378 723 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 SCNN1GP51170 649 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 UGT2B15P54855 530 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 RPP38P78345 283 aaKnown RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 C19orf57Q0VDD7 668 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 IL18R1Q13478 541 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 EFR3AQ14156 821 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 VANGL1Q8TAA9 524 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ENKURQ8TC29 256 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 BLOC1S5Q8TDH9 187 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ABI2Q9NYB9 513 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 NPAP1Q9NZP6 1156 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 H3BM21 787 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ARHGAP33O14559 1287 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 FGF4P08620 206 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ITGA2P17301 1181 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 AKAP5P24588 427 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 HOXC5Q00444 222 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 FADDQ13158 208 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 PARP15Q460N3 678 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 CILP2Q8IUL8 1156 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 RHBDF1Q96CC6 855 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 GRIP1Q9Y3R0 1128 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 FFAR3O14843 346 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 GPR42O15529 346 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 VPS4BO75351 444 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ARIH2O95376 493 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 MTHFD2P13995 350 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 PWP1Q13610 501 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 TIGD4Q8IY51 512 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 RIPOR3Q96MK2 946 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 ABCB9Q9NP78 766 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 DYRK4Q9NR20 520 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 PDGFCQ9NRA1 345 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 TREX1Q9NSU2 369 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 CD274Q9NZQ7 290 aa12.79□□□□□ -0.36
GAPVD1-220ENST00000497580 BTN3A3O00478 584 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 PSMD3O43242 534 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 GLULP15104 373 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 ACVR2AP27037 513 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 DGKEP52429 567 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 FAPQ12884 760 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 TSTQ16762 297 aaKnown RBP12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 AP5B1Q2VPB7 878 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 OR8H3Q8N146 312 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 CACTIN-AS1Q8N1I8 211 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF548Q8NEK5 533 aaPredicted RBP12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 NT5MQ9NPB1 228 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF224Q9NZL3 707 aa12.78□□□□□ -0.36
GAPVD1-220ENST00000497580 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms