RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SMARCAL1Q9NZC9 954 aa16.25■□□□□ 0.19
TRAPPC3-207ENST00000497251 IL1RAPL1Q9NZN1 696 aa16.25■□□□□ 0.19
TRAPPC3-207ENST00000497251 RIMKLBQ9ULI2 386 aa16.25■□□□□ 0.19
TRAPPC3-207ENST00000497251 ICKQ9UPZ9 632 aa16.25■□□□□ 0.19
TRAPPC3-207ENST00000497251 PTRH2Q9Y3E5 179 aaKnown RBP16.25■□□□□ 0.19
TRAPPC3-207ENST00000497251 PVRP15151 417 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 AIMP2Q13155 320 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 OLIG2Q13516 323 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 ELOAQ14241 798 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 DBN1Q16643 649 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 CYP2A13Q16696 494 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 EIF2S3LQ2VIR3 472 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 PLEKHN1Q494U1 663 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 NKAIN1Q4KMZ8 207 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 DNAJC22Q8N4W6 341 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 PRR7Q8TB68 274 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 NAT14Q8WUY8 206 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 ELMO1Q92556 727 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 PEX13Q92968 403 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 TSSK1BQ9BXA7 367 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 ILKAPQ9H0C8 392 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 XKR8Q9H6D3 395 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 ZNF552Q9H707 407 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 FAM60AQ9NP50 221 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 AGPAT4Q9NRZ5 378 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 INTS7Q9NVH2 962 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 P4HTMQ9NXG6 502 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 MAP10Q9P2G4 905 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 SLC5A6Q9Y289 635 aa16.24■□□□□ 0.19
TRAPPC3-207ENST00000497251 DIDO1Q9BTC0 2240 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 SLC5A10A0PJK1 596 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 AGPSO00116 658 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 CBSLP0DN79 551 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 CBSP35520 551 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 CDKN1CP49918 316 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 KYNUQ16719 465 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 Q6ZS92 163 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 PIANPQ8IYJ0 282 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 OR5AR1Q8NGP9 310 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 C5orf34Q96MH7 638 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 WDR54Q9H977 334 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 MRM3Q9HC36 420 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 NXT1Q9UKK6 140 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 COPG1Q9Y678 874 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-207ENST00000497251 CCDC78A2IDD5 438 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 ENO4A6NNW6 628 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 MIF4GDA9UHW6 222 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 DDX3YO15523 660 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 ITGAXP20702 1163 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 MMP11P24347 488 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 STIP1P31948 543 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 RAB28P51157 221 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 MRPL49Q13405 166 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 SPARCL1Q14515 664 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 ZIC1Q15915 447 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 SYTL3Q4VX76 610 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 ZC3H12BQ5HYM0 836 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 TCTE1Q5JU00 501 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 RAD9BQ6WBX8 426 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 NLRP9Q7RTR0 991 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 TXLNBQ8N3L3 684 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 UBL4BQ8N7F7 174 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 FLVCR1-AS1Q8TAF5 88 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 ASZ1Q8WWH4 475 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 SPRTNQ9H040 489 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 KLHL25Q9H0H3 589 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 SLC26A1Q9H2B4 701 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 EURLQ9NYK6 297 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 FER1L5A0AVI2 2057 aa16.22■□□□□ 0.19
TRAPPC3-207ENST00000497251 HEATR9A2RTY3 570 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 ANKUB1A6NFN9 424 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 ISM1B1AKI9 464 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 BHMG1C9JSJ3 638 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 CCL22O00626 93 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 S1PR4O95977 384 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 LDLRP01130 860 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 CDH17Q12864 832 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 POU6F1Q14863 301 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 PRR30Q53SZ7 412 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 CRB2Q5IJ48 1285 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 FAM69BQ5VUD6 431 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 IRAK1BP1Q5VVH5 260 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 OVCH1Q7RTY7 1134 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 SYCE1Q8N0S2 351 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 SLC34A3Q8N130 599 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 ZNF655Q8N720 491 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 RAB11FIP5Q9BXF6 653 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 ASF1BQ9NVP2 202 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 IRAK4Q9NWZ3 460 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 TFR2Q9UP52 801 aa16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 TDRKHQ9Y2W6 561 aaKnown RBP16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 REXO2Q9Y3B8 237 aaKnown RBP16.21■□□□□ 0.19
TRAPPC3-207ENST00000497251 A0A1B0GX78 115 aa16.2■□□□□ 0.18
TRAPPC3-207ENST00000497251 RCCD1A6NED2 376 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms