RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 PVRP15151 417 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 ATP5DP30049 168 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 COILP38432 576 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 PMS2P54278 862 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 RPS15P62841 145 aaKnown RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 UGT8Q16880 541 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 SLC5A12Q1EHB4 618 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 ANKRD22Q5VYY1 191 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 CASC4Q6P4E1 433 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 CCDC137Q6PK04 289 aaKnown RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 CDHR3Q6ZTQ4 885 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 GPR135Q8IZ08 494 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 DSELQ8IZU8 1212 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 C9orf43Q8TAL5 461 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 MR1Q95460 341 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 SLC22A18Q96BI1 424 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 OSBPL9Q96SU4 736 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 MENTQ9BUN1 341 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 ACTR5Q9H9F9 607 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-213ENST00000496347 SPHK1Q9NYA1 384 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 SERTAD3Q9UJW9 196 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 SETXQ7Z333 2677 aaKnown RBP15.18■□□□□ 0.02
HDAC4-213ENST00000496347 FAM237BA0A1B0GVD1 139 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 MEN1O00255 615 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 RAB40ALP0C0E4 278 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 MAGEA3P43357 314 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 ERV3-1Q14264 604 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 KYNUQ16719 465 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 CTSL3PQ5NE16 218 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 PLEKHS1Q5SXH7 462 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 FAM198BQ6UWH4 519 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 TRIM73Q86UV7 250 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 CAND1Q86VP6 1230 aaKnown RBP15.18■□□□□ 0.02
HDAC4-213ENST00000496347 CILP2Q8IUL8 1156 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 REXO1L1PQ8IX06 675 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 SYTL1Q8IYJ3 562 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 SLC35F6Q8N357 371 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 SLC38A9Q8NBW4 561 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 COG1Q8WTW3 980 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 THAP4Q8WY91 577 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 N4BP2L2Q92802 583 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-213ENST00000496347 CLIP3Q96DZ5 547 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 KLHL25Q9H0H3 589 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 PLAGL1Q9UM63 463 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 SNX12Q9UMY4 172 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 MAN2B2Q9Y2E5 1009 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 NEU2Q9Y3R4 380 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 AP1M2Q9Y6Q5 423 aa15.18■□□□□ 0.02
HDAC4-213ENST00000496347 FLNCQ14315 2725 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 MAGEB16A2A368 324 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 CDC14CA4D256 554 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 RASGRF2O14827 1237 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 RFPL1O75677 317 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 FKBP9O95302 570 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 S1PR4O95977 384 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 CD9P21926 228 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
HDAC4-213ENST00000496347 CCNFP41002 786 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 ZNF470Q6ECI4 717 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 ATG14Q6ZNE5 492 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 RAB42Q8N4Z0 105 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 LINC01555Q8NAE3 123 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 OR2L8Q8NGY9 312 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 PROKR1Q8TCW9 393 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 FOPNLQ96NB1 174 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 BIRC8Q96P09 236 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 C17orf62Q9BQA9 187 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 NLNQ9BYT8 704 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 SLC7A5P2Q9GIP4 190 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 CHST8Q9H2A9 424 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 KCNF1Q9H3M0 494 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 PCMTD2Q9NV79 361 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 INTS10Q9NVR2 710 aaKnown RBP15.17■□□□□ 0.02
HDAC4-213ENST00000496347 SRPK3Q9UPE1 567 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 PADI2Q9Y2J8 665 aa15.17■□□□□ 0.02
HDAC4-213ENST00000496347 SPENQ96T58 3664 aaKnown RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 SDR42E2A6NKP2 422 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 ISM1B1AKI9 464 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 C9J4A7 227 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 MKRN2OSH3BPM6 223 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 ZSCAN9O15535 394 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 SUV39H1O43463 412 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 AVILO75366 819 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 OR2B3O76000 313 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 FURINP09958 794 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 IL10RAQ13651 578 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 DHX34Q14147 1143 aaKnown RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 GRB7Q14451 532 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 GBX1Q14549 363 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 NCF4Q15080 339 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 ZIC1Q15915 447 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 PRAMEF17Q5VTA0 474 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms