RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 FNBP1Q96RU3 617 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 FEVQ99581 238 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 LMF2Q9BU23 707 aaKnown RBP3.5□□□□□ -1.85
CLK1-214ENST00000496205 TUBB2BQ9BVA1 445 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 VN1R1Q9GZP7 353 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 EBF2Q9HAK2 575 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 B3GAT1Q9P2W7 334 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 LRWD1Q9UFC0 647 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 VDAC3Q9Y277 283 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 PLSCR5A0PG75 271 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 DVL1O14640 695 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 WDR46O15213 610 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 IPO8O15397 1037 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 KRT36O76013 467 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 TFAP2AP05549 437 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ZFYP08048 801 aaPredicted RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 FAM58BPP0C7Q3 252 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SMIM18P0DKX4 95 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ADRA2CP18825 462 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 USP8P40818 1118 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MTHFRP42898 656 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 PEX5P50542 639 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MAPK12P53778 367 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 PTENP60484 403 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MAT1AQ00266 395 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 UBXN1Q04323 297 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MBTD1Q05BQ5 628 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ILF3Q12906 894 aaKnown RBP eCLIP3.49□□□□□ -1.85
CLK1-214ENST00000496205 TRAF2Q12933 501 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ZRSR1Q15695 479 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 PHLDA2Q53GA4 152 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SPDYCQ5MJ68 293 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 C6orf136Q5SQH8 315 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 CEP85LQ5SZL2 805 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 NDUFAF5Q5TEU4 345 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 WBP2NLQ6ICG8 309 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 PRR27Q6MZM9 219 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 KLC3Q6P597 504 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SPATA19Q7Z5L4 167 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ABI3BPQ7Z7G0 1075 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SLC9B2Q86UD5 537 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 METTL23Q86XA0 190 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MAML2Q8IZL2 1156 aaPredicted RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 CIARTQ8N365 385 aaPredicted RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 CPSF7Q8N684 471 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 OR13J1Q8NGT2 312 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 DEPDC1BQ8WUY9 529 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 KCNE4Q8WWG9 221 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ROBO4Q8WZ75 1007 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SYN2Q92777 582 aaPredicted RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 EXT2Q93063 718 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 FAM162AQ96A26 154 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SLAMF9Q96A28 289 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 TBC1D31Q96DN5 1066 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 CDCA5Q96FF9 252 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 SPATA33Q96N06 139 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 GBP5Q96PP8 586 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 RAB3IPQ96QF0 476 aaPredicted RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 PKP4Q99569 1192 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 BTBD10Q9BSF8 475 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 THUMPD3Q9BV44 507 aaKnown RBP3.49□□□□□ -1.85
CLK1-214ENST00000496205 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 ARRDC1-AS1Q9H2J1 176 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 UBTD1Q9HAC8 227 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 DNAJC4Q9NNZ3 241 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 TCF7L2Q9NQB0 619 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 DPP3Q9NY33 737 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 PTTG2Q9NZH5 202 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 MTUS1Q9ULD2 1270 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 KCNK7Q9Y2U2 307 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 HEG1Q9ULI3 1381 aa3.49□□□□□ -1.85
CLK1-214ENST00000496205 WDR81Q562E7 1941 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PCDH11YQ9BZA8 1340 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 IGHV4OR15-8A0A075B7B6 117 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 A0A087WV48 116 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 A4D1N5 150 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 MAGEA13PA6NCF6 341 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 ANXA2P2A6NMY6 339 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 ANKRD66B4E2M5 251 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 C19orf81C9J6K1 198 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 AP5Z1O43299 807 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 BAG4O95429 457 aaKnown RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 GBAP04062 536 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 CSN3P07498 182 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 THEGLP0DJG4 465 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 CSF2RAP15509 400 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PDGFRAP16234 1089 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 CKMT2P17540 419 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PTGER4P35408 488 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 AHRP35869 848 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 HNF4AP41235 474 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 GMPSP49915 693 aaPredicted RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 ALDH3A2P51648 485 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 ZNF75DP51815 510 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 POU3F1Q03052 451 aaPredicted RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 C17orf67Q0P5P2 114 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PPP2R5CQ13362 524 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 ITGA7Q13683 1181 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms