RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TSPAN12O95859 305 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 SPRP35270 261 aaPredicted RBP10.78□□□□□ -0.68
APTX-230ENST00000494649 ETV5P41161 510 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 SKIV2L2P42285 1042 aaKnown RBP10.78□□□□□ -0.68
APTX-230ENST00000494649 IL2P60568 153 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 YBX1P67809 324 aaKnown RBP10.78□□□□□ -0.68
APTX-230ENST00000494649 PHKG1Q16816 387 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 GRTP1Q5TC63 336 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 TTC23LQ6PF05 361 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 SUSD1Q6UWL2 747 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 CYS1Q717R9 158 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 PKP4Q99569 1192 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 GPR22Q99680 433 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 MENTQ9BUN1 341 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 STRADBQ9C0K7 418 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 EPB41L4BQ9H329 900 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 TFB2MQ9H5Q4 396 aaKnown RBP10.78□□□□□ -0.68
APTX-230ENST00000494649 ACTR10Q9NZ32 417 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 POLG2Q9UHN1 485 aa10.78□□□□□ -0.68
APTX-230ENST00000494649 DMXL2Q8TDJ6 3036 aa10.77□□□□□ -0.68
APTX-230ENST00000494649 A0A087WUV0 522 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 EXOC1LA0A1B0GW35 172 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 PIPSLA2A3N6 862 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 HMX2A2RU54 273 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CDC7O00311 574 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 SHBGP04278 402 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 RPN2P04844 631 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 INHBAP08476 426 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CHRM5P08912 532 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 JMJD7P0C870 316 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 STMN1P16949 149 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CD9P21926 228 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CDH3P22223 829 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 MAP4P27816 1152 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 PEBP1P30086 187 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 CCKBRP32239 447 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CSTF2P33240 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
APTX-230ENST00000494649 LSSP48449 732 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 RGS4P49798 205 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 IRF9Q00978 393 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 FOXM1Q08050 763 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 KLHL35Q6PF15 583 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 FBXO39Q8N4B4 442 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 DENND1AQ8TEH3 1009 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ASB11Q8WXH4 323 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 RAD51AP1Q96B01 352 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ALKBH8Q96BT7 664 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 ZDHHC12Q96GR4 267 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CMKLR1Q99788 373 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 PARD6BQ9BYG5 372 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 TXLNGYQ9BZA5 131 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 APMAPQ9HDC9 416 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CORO1CQ9ULV4 474 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 MN1Q10571 1320 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 NCF1BA6NI72 391 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 NCF1CA8MVU1 366 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 PLD2O14939 933 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ZBTB14O43829 449 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 BRINP1O60477 761 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 TNFSF15O95150 251 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 SLC16A8O95907 504 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CATP04040 527 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 CCDC166P0CW27 439 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ENO3P13929 434 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 NCF1P14598 390 aaPredicted RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 PKLRP30613 574 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 SHMT2P34897 504 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 SLCO1A2P46721 670 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 RAB28P51157 221 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 POU4F1Q01851 419 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CSHL1Q14406 222 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 FBXO48Q5FWF7 155 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 EXT2Q93063 718 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 NAF1Q96HR8 494 aaKnown RBP10.77□□□□□ -0.69
APTX-230ENST00000494649 SOHLH2Q9NX45 425 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 CTNNAL1Q9UBT7 734 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 TBK1Q9UHD2 729 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 PDE10AQ9Y233 779 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 IKBKGQ9Y6K9 419 aa10.77□□□□□ -0.69
APTX-230ENST00000494649 ANKRD12Q6UB98 2062 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 CCDC187A0A096LP49 1063 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 SLC9B1P1A6NJY1 282 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 FOXO6A8MYZ6 492 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 C2orf74A8MZ97 194 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 RASGRF2O14827 1237 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 NRP2O60462 931 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 C9P02748 559 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 MPC1LP0DKB6 136 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 CBSLP0DN79 551 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 FGF3P11487 239 aaPredicted RBP10.76□□□□□ -0.69
APTX-230ENST00000494649 ST6GAL1P15907 406 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 UGT2B7P16662 529 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 ATP5DP30049 168 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 CBSP35520 551 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms