RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SP140Q13342 867 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 RTP5Q14D33 572 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
TRA2A-209ENST00000494255 CYHR1Q6ZMK1 362 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 UBE2R2Q712K3 238 aaPredicted RBP12.09□□□□□ -0.47
TRA2A-209ENST00000494255 TAOK1Q7L7X3 1001 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 ARHGAP22Q7Z5H3 698 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 LSMEM2Q8N112 164 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 CARFQ8N187 725 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 FBXO15Q8NCQ5 510 aaPredicted RBP12.09□□□□□ -0.47
TRA2A-209ENST00000494255 OR9A1PQ8NGU1 263 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 MCOLN3Q8TDD5 553 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 NRTNQ99748 197 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 ACTR10Q9NZ32 417 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 SPATA7Q9P0W8 599 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 POMT2Q9UKY4 750 aa12.09□□□□□ -0.47
TRA2A-209ENST00000494255 ZNF839A8K0R7 811 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 GFYI3L273 518 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 SLC16A5O15375 505 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 RIPK2O43353 540 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 KIF1CO43896 1103 aaKnown RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 TPBGLP0DKB5 382 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 CDH3P22223 829 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 RBMS1P29558 406 aaKnown RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 MSH2P43246 934 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 KPNA2P52292 529 aaKnown RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 PGGT1BP53609 377 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 PPP1CAP62136 330 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 ZNF460Q14592 562 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 KIR2DS3Q14952 304 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 CCSMST1Q4G0I0 132 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 ANKS6Q68DC2 871 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 FAM129CQ86XR2 697 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 CEP97Q8IW35 865 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 OR2L8Q8NGY9 312 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 GATA6Q92908 595 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 SLC22A18Q96BI1 424 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 IL17FQ96PD4 163 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 MAP3K3Q99759 626 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 TRIM54Q9BYV2 358 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 ZNF768Q9H5H4 540 aaKnown RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 PISDQ9UG56 409 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.08□□□□□ -0.487e-6■■□□□ 11.8
TRA2A-209ENST00000494255 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
TRA2A-209ENST00000494255 KIF26BQ2KJY2 2108 aa12.08□□□□□ -0.48
TRA2A-209ENST00000494255 EXOC1LA0A1B0GW35 172 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 EFCAB7A8K855 629 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 ISM1B1AKI9 464 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 MYO1CO00159 1063 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 MAP3K7O43318 606 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 TSPAN12O95859 305 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 HGFP14210 728 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 PRDX3P30048 256 aaKnown RBP12.07□□□□□ -0.48
TRA2A-209ENST00000494255 HSD17B2P37059 387 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
TRA2A-209ENST00000494255 SEPHS1P49903 392 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 SERPINB9P50453 376 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 MAPK10P53779 464 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 RAB10P61026 200 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 VSNL1P62760 191 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 GRB7Q14451 532 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.07□□□□□ -0.48
TRA2A-209ENST00000494255 MROH9Q5TGP6 573 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 SPESP1Q6UW49 350 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 RAPH1Q70E73 1250 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 KMT5CQ86Y97 462 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 PDLIM5Q96HC4 596 aaKnown RBP12.07□□□□□ -0.48
TRA2A-209ENST00000494255 PKP4Q99569 1192 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 CCDC77Q9BR77 488 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 PARVBQ9HBI1 364 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 C1GALT1Q9NS00 363 aa12.07□□□□□ -0.48
TRA2A-209ENST00000494255 IGHV5-51A0A0C4DH38 117 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
TRA2A-209ENST00000494255 PHGDHO43175 533 aaKnown RBP12.06□□□□□ -0.48
TRA2A-209ENST00000494255 TNFSF15O95150 251 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 HIST1H2AGP0C0S8 130 aaPredicted RBP12.06□□□□□ -0.48
TRA2A-209ENST00000494255 UGT2B7P16662 529 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 HIST1H2ADP20671 130 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 CRABP2P29373 138 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 BMPR2Q13873 1038 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 ARHGAP19Q14CB8 494 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 ERCC6LQ2NKX8 1250 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 TMEM207Q6UWW9 146 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 UNQ6494/PRO21346Q6UXR6 183 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 TAX1BP1Q86VP1 789 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 RASGRP3Q8IV61 690 aa12.06□□□□□ -0.48
TRA2A-209ENST00000494255 C2orf73Q8N5S3 287 aaPredicted RBP12.06□□□□□ -0.48
TRA2A-209ENST00000494255 UBLCP1Q8WVY7 318 aaPredicted RBP12.06□□□□□ -0.48
TRA2A-209ENST00000494255 KLHL6Q8WZ60 621 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms