RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WNT9AO14904 365 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PRKCHP24723 683 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PCDH1Q08174 1060 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PDGFRLQ15198 375 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 CYP2U1Q7Z449 544 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 ZC3HC1Q86WB0 502 aaKnown RBP18.78■□□□□ 0.6
COL27A1-207ENST00000494090 KBTBD7Q8WVZ9 684 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 C12orf66Q96MD2 445 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 FFAR2O15552 330 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.78■□□□□ 0.64e-7■□□□□ 9.7
COL27A1-207ENST00000494090 FAM129CQ86XR2 697 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 HDDC3Q8N4P3 179 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 COX18Q8N8Q8 333 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PLEKHO2Q8TD55 490 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 LRRC58Q96CX6 371 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 AKTIPQ9H8T0 292 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 EBF2Q9HAK2 575 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 SLC31A1O15431 190 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 PRKCZQ05513 592 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 POMZP3Q6PJE2 187 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 EPGNQ6UW88 154 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 MBOAT1Q6ZNC8 495 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 LAPTM4BQ86VI4 370 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 IPCEF1Q8WWN9 437 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-207ENST00000494090 NUS1Q96E22 293 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 CAMK1GQ96NX5 476 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 DUSP26Q9BV47 211 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 OSER1Q9NX31 292 aa18.78■□□□□ 0.6
COL27A1-207ENST00000494090 EI24O14681 340 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 CYP4F8P98187 520 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 TYSND1Q2T9J0 566 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 INAVAQ3KP66 663 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 PHF12Q96QT6 1004 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 FEM1AQ9BSK4 669 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 YTHDF1Q9BYJ9 559 aaKnown RBP18.77■□□□□ 0.6
COL27A1-207ENST00000494090 PLEKHA1Q9HB21 404 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-207ENST00000494090 DLX3O60479 287 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 NME6O75414 186 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-207ENST00000494090 XRCC1P18887 633 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-207ENST00000494090 MAGP20916 626 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 VBP1P61758 197 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 PPP3R1P63098 170 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 FPGSQ05932 587 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 SCN1BQ07699 218 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 HSPB3Q12988 150 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 DAG1Q14118 895 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 OR51F1A6NGY5 319 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 PITPNM1O00562 1244 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 NOBOXO60393 691 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 CYB5AP00167 134 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 NR4A1P22736 598 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 CCKBRP32239 447 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 ZFP69Q49AA0 526 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 ADGRF1Q5T601 910 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 OR4C6Q8NH72 309 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 SH3RF2Q8TEC5 729 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 SUSD3Q96L08 255 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 GPR22Q99680 433 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 FAM53CQ9NYF3 392 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 ZIM2Q9NZV7 527 aa18.77■□□□□ 0.6
COL27A1-207ENST00000494090 GADD45GO95257 159 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 SEC13P55735 322 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 C1QTNF8P60827 252 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 PPP2R2BQ00005 443 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 SH3D19Q5HYK7 790 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 SLC51AQ86UW1 340 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 GALNT15Q8N3T1 639 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 ZCCHC10Q8TBK6 192 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 DDX1Q92499 740 aaKnown RBP18.77■□□□□ 0.59
COL27A1-207ENST00000494090 GTPBP3Q969Y2 492 aaKnown RBP18.77■□□□□ 0.59
COL27A1-207ENST00000494090 GAL3ST4Q96RP7 486 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 SUV39H2Q9H5I1 410 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 CIDEBQ9UHD4 219 aa18.77■□□□□ 0.59
COL27A1-207ENST00000494090 REM1O75628 298 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 RPLP0P05388 317 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 MTHFD1P11586 935 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 FOXM1Q08050 763 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 RBM48Q5RL73 367 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ARNTL2Q8WYA1 636 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PIK3R3Q92569 461 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 COMMD4Q9H0A8 199 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 MINDY3Q9H8M7 445 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 NKX1-2Q9UD57 310 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PSIP1O75475 530 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ECI2O75521 394 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 RBMXL2O75526 392 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 AGR2O95994 175 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PIK3CBP42338 1070 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 YAP1P46937 504 aaKnown RBP18.76■□□□□ 0.59
COL27A1-207ENST00000494090 CRISP3P54108 245 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 SIRPB2Q5JXA9 342 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PPP2R2DQ66LE6 453 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 CDKN2AIPNLQ96HQ2 116 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ABCB9Q9NP78 766 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ZDHHC3Q9NYG2 299 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ZDHHC2Q9UIJ5 367 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 IQCMA0A1B0GVH7 501 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ARVCFO00192 962 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 FESP07332 822 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms