RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 HM13Q8TCT9 377 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PROKR1Q8TCW9 393 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CXorf40AQ8TE69 158 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 RAB7BQ96AH8 199 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TMEM125Q96AQ2 219 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 VPS33AQ96AX1 596 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TMEM159Q96B96 161 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PYCR2Q96C36 320 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 RSRC1Q96IZ7 334 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 S1PR5Q9H228 398 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 LRTM1Q9HBL6 345 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CMTM6Q9NX76 183 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF490Q9ULM2 529 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 LAMA3Q16787 3333 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TCRBV3S1A0A5B6 114 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 NPIPB8E9PQR5 432 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 MID1O15344 667 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 AP1G1O43747 822 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 KRT6AP02538 564 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 KRT6BP04259 564 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 RPSAP08865 295 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 LAMP2P13473 410 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HSD17B1P14061 328 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 CD22P20273 847 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PRPH2P23942 346 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 SLC6A2P23975 617 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 WASP42768 502 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 MAPK9P45984 424 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 KRT6CP48668 564 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TAS2R38P59533 333 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 YBX1P67809 324 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TRAP1Q12931 704 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 CAMK2GQ13555 558 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 GTF2H3Q13889 308 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TRIM25Q14258 630 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 CST6Q15828 149 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 IMPG1Q17R60 797 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PLA2G4EQ3MJ16 856 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 RFTN2Q52LD8 501 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 CRTC3Q6UUV7 619 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 ADAMTSL4Q6UY14 1074 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TRAPPC5Q8IUR0 188 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 SLC15A3Q8IY34 581 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 RGL4Q8IZJ4 473 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 FBXO15Q8NCQ5 510 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 OR56A3Q8NH54 315 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 MCOLN3Q8TDD5 553 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 COX14Q96I36 57 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 FCRL1Q96LA6 429 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 LINC00615Q96LM1 132 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF184Q99676 751 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 HOPXQ9BPY8 73 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 H2AFJQ9BTM1 129 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 RPP25Q9BUL9 199 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 TRPM6Q9BX84 2022 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 ATG10Q9H0Y0 220 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PCDHAC1Q9H158 963 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 RSPH9Q9H1X1 276 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 OR2AG1Q9H205 316 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 IL1RL2Q9HB29 575 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 INTS7Q9NVH2 962 aaKnown RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 GID8Q9NWU2 228 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 C6orf203Q9P0P8 240 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 ATXN10Q9UBB4 475 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 BCAP29Q9UHQ4 241 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 LRCH1Q9Y2L9 728 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PCDHA9Q9Y5H5 950 aa10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PCYT1BQ9Y5K3 369 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-208ENST00000494028 PCM1Q15154 2024 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 C15orf38-AP3S2A0A0A6YYH1 394 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SERTM1A2A2V5 107 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DYTNA2CJ06 578 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 H3BM21 787 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SOX1O00570 391 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LIN7AO14910 233 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 VEGFDO43915 354 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DNAJA2O60884 412 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PDYNP01213 254 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PCCBP05166 539 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SLC2A4P14672 509 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 JUPP14923 745 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF8P17098 575 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PDHA2P29803 388 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 TBPL1P62380 186 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DLX2Q07687 328 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ABRQ12979 859 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 BNIP2Q12982 314 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PRKG2Q13237 762 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 MAD2L1Q13257 205 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms