RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 CTAGE4Q8IX94 777 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 PALM2Q8IXS6 379 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZBTB2Q8N680 514 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 SIDT2Q8NBJ9 832 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 OR5K2Q8NHB8 316 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 PYROXD1Q8WU10 500 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 RNF31Q96EP0 1072 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 NDNQ99608 321 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 NRTNQ99748 197 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 RAB33BQ9H082 229 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 SLC17A6Q9P2U8 582 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 EPHA6Q9UF33 1036 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 ACSL6Q9UKU0 697 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 SLC39A10Q9ULF5 831 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 ICKQ9UPZ9 632 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 CDYLQ9Y232 598 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 PCDHB11Q9Y5F2 797 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 B3GALT1Q9Y5Z6 326 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 MRFAP1Q9Y605 127 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 TEX264Q9Y6I9 313 aa10.1□□□□□ -0.79
TRAPPC12-222ENST00000493792 IGHV5-51A0A0C4DH38 117 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ESYT3A0FGR9 886 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 PIPSLA2A3N6 862 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TLCD2A6NGC4 264 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ISM1B1AKI9 464 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 B4E171 279 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 C9orf172C9J069 976 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 MATN2O00339 956 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 BTN3A3O00478 584 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 POLR1CO15160 346 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 NVLO15381 856 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TOX3O15405 576 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 MAP3K7O43318 606 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 SLCO2B1O94956 709 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ANKRD34CP0C6C1 535 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TSPAN7P41732 249 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ADARP55265 1226 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 RAB15P59190 212 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 SH3BP2P78314 561 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 MC2RQ01718 297 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 GUCY2DQ02846 1103 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 CAV1Q03135 178 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 CUL1Q13616 776 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TUBB2AQ13885 445 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 KCNAB1Q14722 419 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ACSBG2Q5FVE4 666 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZNF549Q6P9A3 640 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TRMT10BQ6PF06 316 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 UNC5DQ6UXZ4 953 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 PRSS42Q7Z5A4 293 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 RASGRP3Q8IV61 690 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 DCUN1D3Q8IWE4 304 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 C2orf73Q8N5S3 287 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 GPATCH11Q8N954 259 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 C2CD4AQ8NCU7 369 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 UBXN4Q92575 508 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 PMEPA1Q969W9 287 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 PPM1MQ96MI6 270 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 OR6C1Q96RD1 312 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 CCNL2Q96S94 520 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 CD180Q99467 661 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 GPR21Q99679 349 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 WDR83Q9BRX9 315 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TUBB2BQ9BVA1 445 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ASPSCR1Q9BZE9 553 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 KLHL25Q9H0H3 589 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZNF768Q9H5H4 540 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TFB2MQ9H5Q4 396 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 APMAPQ9HDC9 416 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 LATS2Q9NRM7 1088 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ACTR10Q9NZ32 417 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 GALPQ9UBC7 116 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TRMT6Q9UJA5 497 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 HEMK1Q9Y5R4 338 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 NFS1Q9Y697 457 aa10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 TLN1Q9Y490 2541 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-222ENST00000493792 CLEC18AA5D8T8 446 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC9B1P1A6NJY1 282 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 TP73O15350 636 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 PVRP15151 417 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 SAT1P21673 171 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 MCM3P25205 808 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 PRDX3P30048 256 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 MGAT5Q09328 741 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 TUBB3Q13509 450 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 TSTA3Q13630 321 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 UBAP2LQ14157 1087 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 TRADDQ15628 312 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 KLHL38Q2WGJ6 581 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 TMTC4Q5T4D3 741 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 STEAP4Q687X5 459 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 UGT3A1Q6NUS8 523 aa10.08□□□□□ -0.8
TRAPPC12-222ENST00000493792 CLEC18BQ6UXF7 455 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms