RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MYPOPQ86VE0 399 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 COMMD2Q86X83 199 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 ARHGAP24Q8N264 748 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 DNAJC22Q8N4W6 341 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 TSPAN14Q8NG11 270 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 SLAMF9Q96A28 289 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 POM121L2Q96KW2 1035 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF599Q96NL3 588 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 DGAT2Q96PD7 388 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 MCRIP2Q9BUT9 160 aaKnown RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 TRAF4Q9BUZ4 470 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 CPVLQ9H3G5 476 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 SLC35C2Q9NQQ7 365 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 GKN1Q9NS71 199 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 INTS9Q9NV88 658 aaKnown RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 ANAPC2Q9UJX6 822 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 ZHX1Q9UKY1 873 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 PCDHGB4Q9UN71 923 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 MMP24Q9Y5R2 645 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 SMCHD1A6NHR9 2005 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 TCRBV21S2A2A0A5A6 115 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 DCXO43602 365 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF821O75541 412 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 CDC123O75794 336 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 BEST1O76090 585 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 GFPT2O94808 682 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 HMBSP08397 361 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 LINGO3P0C6S8 592 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 NNMTP40261 264 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 UBXN2AP68543 259 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ITPRIPL2Q3MIP1 535 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 SPDYCQ5MJ68 293 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 GARNL3Q5VVW2 1013 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 PRR27Q6MZM9 219 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 PWWP2BQ6NUJ5 590 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF613Q6PF04 617 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 CFAP61Q8NHU2 1237 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF653Q96CK0 615 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 KRT12Q99456 494 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 RAD9AQ99638 391 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 INTS10Q9NVR2 710 aaKnown RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 STK26Q9P289 416 aa3.75□□□□□ -1.81
ITGB1-216ENST00000493758 FBXO2Q9UK22 296 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 ABT1Q9ULW3 272 aaKnown RBP3.75□□□□□ -1.81
ITGB1-216ENST00000493758 A0A1W2PPQ1 181 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SH2B2O14492 632 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 ADAM20O43506 726 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 AHCYL1O43865 530 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 BCL10O95999 233 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 VTNP04004 478 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 HSPA8P11142 646 aaKnown RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 MTHFRP42898 656 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 CDH13P55290 713 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 TPD52P55327 224 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 DMPKQ09013 629 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 HSPB3Q12988 150 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 TMEM187Q14656 261 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 RALBP1Q15311 655 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SNAPC1Q16533 368 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SYT14P1Q58G82 188 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 IGSF11Q5DX21 431 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 Q6ZSR9 355 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 PCGF5Q86SE9 256 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF614Q8N883 585 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 APPL2Q8NEU8 664 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 OR4C3Q8NH37 302 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SSMEM1Q8WWF3 244 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SUSD6Q92537 303 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF689Q96CS4 500 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 MOCOSQ96EN8 888 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 LINC00479Q96M42 142 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 ABHD1Q96SE0 405 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 SEPHS2Q99611 448 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 TBC1D17Q9HA65 648 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 Q9N2K0 584 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 PLCXD1Q9NUJ7 323 aa3.74□□□□□ -1.81
ITGB1-216ENST00000493758 PRMT7Q9NVM4 692 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 KLHL8Q9P2G9 620 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 DDX25Q9UHL0 483 aaKnown RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 MRPS28Q9Y2Q9 187 aaKnown RBP3.74□□□□□ -1.81
ITGB1-216ENST00000493758 ERAL1O75616 437 aaKnown RBP3.73□□□□□ -1.81
ITGB1-216ENST00000493758 IGHV2-70P01814 119 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 RAB40ALP0C0E4 278 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 HAPLN1P10915 354 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-216ENST00000493758 GP1BBP13224 206 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 ACTN2P35609 894 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 LMAN1P49257 510 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 LIG4P49917 911 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 HNRNPKP61978 463 aaKnown RBP eCLIP3.73□□□□□ -1.81
ITGB1-216ENST00000493758 LMOD3Q0VAK6 560 aa3.73□□□□□ -1.81
ITGB1-216ENST00000493758 ITGA7Q13683 1181 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms