RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ARHGAP12Q8IWW6 846 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 MSRB3Q8IXL7 192 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 B3GALNT2Q8NCR0 500 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 GMLQ99445 158 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 B3GNT4Q9C0J1 378 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 GOLGA2P5Q9HBQ8 144 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 PDP1Q9P0J1 537 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 TEKT2Q9UIF3 430 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 MICAL3Q7RTP6 2002 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 SLC7A4O43246 635 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 KIAA0513O60268 411 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 SEC22BO75396 215 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 SCELO95171 688 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF682O95780 498 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 MRPL19P49406 292 aaKnown RBP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 POU6F2P78424 691 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 PTCHD3Q3KNS1 767 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 FAM174BQ3ZCQ3 159 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 FBXO47Q5MNV8 452 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 IL27RAQ6UWB1 636 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 PAMR1Q6UXH9 720 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 GPRIN1Q7Z2K8 1008 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 P3H2Q8IVL5 708 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 CCDC117Q8IWD4 279 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 ENTHD1Q8IYW4 607 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 RHEBL1Q8TAI7 183 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 TMCO6Q96DC7 493 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 TIGARQ9NQ88 270 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 C12orf4Q9NQ89 552 aa11.45□□□□□ -0.58
HDAC4-210ENST00000493582 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-210ENST00000493582 MATN3O15232 486 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TSPAN1O60635 241 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 CSF2P04141 144 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 PIK3CBP42338 1070 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 OAZ1P54368 228 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 EFR3AQ14156 821 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SEMA3AQ14563 771 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 NR6A1Q15406 480 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 FAM205BPQ63HN1 556 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 DPY19L3Q6ZPD9 716 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 IDO2Q6ZQW0 420 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GALNT10Q86SR1 603 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 NLRP8Q86W28 1048 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ATG16L2Q8NAA4 619 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF675Q8TD23 568 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 IPCEF1Q8WWN9 437 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SLC13A3Q8WWT9 602 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 PYURFQ96I23 114 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SPATA33Q96N06 139 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GON7Q9BXV9 100 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 UCK2Q9BZX2 261 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TFB2MQ9H5Q4 396 aaKnown RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 CCDC59Q9P031 241 aaKnown RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 FBXO9Q9UK97 447 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 HSPE1-MOB4S4R3N1 261 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 UGT2B17O75795 530 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 POLR2CP19387 275 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ARHGDIAP52565 204 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 MAPKAPK3Q16644 382 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 DDR2Q16832 855 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 AP5B1Q2VPB7 878 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ARMCX4Q5H9R4 360 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 KIAA1614Q5VZ46 1190 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 RGMBQ6NW40 437 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GPR149Q86SP6 731 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 OSTM1Q86WC4 334 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 OR4M1Q8NGD0 313 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 DEDD2Q8WXF8 326 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TTPALQ9BTX7 342 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 CCDC32Q9BV29 185 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 KRT84Q9NSB2 600 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ADAMTS5Q9UNA0 930 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 KERAO60938 352 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 NOS1APO75052 506 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SLITRK5O94991 958 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 C22orf31O95567 290 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 RPS17P08708 135 aaKnown RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SLC2A3P11169 496 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SOX6P35712 828 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ETV6P41212 452 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 IL12RB1P42701 662 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 AIF1P55008 147 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 ERVPABLB-1P60509 514 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 MADCAM1Q13477 382 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 IHHQ14623 411 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TRIM71Q2Q1W2 868 aaKnown RBP11.44□□□□□ -0.58
HDAC4-210ENST00000493582 GPRIN3Q6ZVF9 776 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 AMIGO1Q86WK6 493 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 MCCC1Q96RQ3 725 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms