RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 DEFB110Q30KQ9 67 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 C1orf189Q5VU69 101 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 AGAP7PQ5VUJ5 663 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 YOD1Q5VVQ6 348 aaPredicted RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 B3GNTL1Q67FW5 361 aaPredicted RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 FCRL6Q6DN72 434 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 DARS2Q6PI48 645 aaKnown RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 Q6ZS92 163 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 OR5K2Q8NHB8 316 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 NAT14Q8WUY8 206 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ELMO1Q92556 727 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 MOCOSQ96EN8 888 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 DNAJC1Q96KC8 554 aaKnown RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 AGAP4Q96P64 663 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 HEMGNQ9BXL5 484 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 FAM96AQ9H5X1 160 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 XKR8Q9H6D3 395 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 WDR54Q9H977 334 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 NLE1Q9NVX2 485 aaPredicted RBP11.36□□□□□ -0.59
FDPS-215ENST00000490140 SMARCAL1Q9NZC9 954 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ICKQ9UPZ9 632 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ANKRD12Q6UB98 2062 aa11.36□□□□□ -0.59
FDPS-215ENST00000490140 ISM1B1AKI9 464 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 PSMD3O43242 534 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 FKBP9O95302 570 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 CLDN1O95832 211 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 ALBP02768 609 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 RNF224P0DH78 156 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 MMP11P24347 488 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 PDHA2P29803 388 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 CTNNA1P35221 906 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 GLRBP48167 497 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 ZNF658BQ4V348 819 aaPredicted RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 ZC3H12BQ5HYM0 836 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 TCTE1Q5JU00 501 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 PRAMEF13Q5VWM6 474 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 MRPL14Q6P1L8 145 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 PACS1Q6VY07 963 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 UNC5AQ6ZN44 842 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 TRIM73Q86UV7 250 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 TICAM1Q8IUC6 712 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 ZNF655Q8N720 491 aaPredicted RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 OR5AR1Q8NGP9 310 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 STYXQ8WUJ0 223 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 C19orf60Q96EN9 201 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 MRFAP1L1Q96HT8 127 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 OR2A14Q96R47 310 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 GORASP1Q9BQQ3 440 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 RAB11FIP5Q9BXF6 653 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 OSBPL8Q9BZF1 889 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 IL1RAPL1Q9NZN1 696 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 DHCR7Q9UBM7 475 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 CDC23Q9UJX2 597 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 CDYLQ9Y232 598 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 TDRKHQ9Y2W6 561 aaKnown RBP11.35□□□□□ -0.59
FDPS-215ENST00000490140 MRFAP1Q9Y605 127 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 FER1L5A0AVI2 2057 aa11.35□□□□□ -0.59
FDPS-215ENST00000490140 CYLC1P35663 651 aaPredicted RBP11.34□□□□□ -0.59
FDPS-215ENST00000490140 TSFMP43897 325 aaKnown RBP11.34□□□□□ -0.59
FDPS-215ENST00000490140 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 RAB28P51157 221 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 RWDD2BP57060 319 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 SLC9A5Q14940 896 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 TLR1Q15399 786 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 DBN1Q16643 649 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 TUBB8Q3ZCM7 444 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 FAM180AQ6UWF9 173 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 PPP1R32Q7Z5V6 425 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 LINC00523Q86TU6 105 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 CCDC170Q8IYT3 715 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 RAB42Q8N4Z0 105 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 CLDN19Q8N6F1 224 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
FDPS-215ENST00000490140 GSDMBQ8TAX9 411 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 BARD1Q99728 777 aaKnown RBP11.34□□□□□ -0.59
FDPS-215ENST00000490140 SPRTNQ9H040 489 aaPredicted RBP11.34□□□□□ -0.59
FDPS-215ENST00000490140 GOLPH3Q9H4A6 298 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 FAM60AQ9NP50 221 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 FBXL4Q9UKA2 621 aa11.34□□□□□ -0.59
FDPS-215ENST00000490140 SVILO95425 2214 aa11.33□□□□□ -0.59
FDPS-215ENST00000490140 H3BMH7 237 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 HNRNPRO43390 633 aaKnown RBP11.33□□□□□ -0.6
FDPS-215ENST00000490140 S1PR4O95977 384 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 EDN3P14138 238 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 ALAS2P22557 587 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 MSNP26038 577 aaKnown RBP11.33□□□□□ -0.6
FDPS-215ENST00000490140 GABRA4P48169 554 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 CDC16Q13042 620 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 OLIG2Q13516 323 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 GRM7Q14831 915 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 POU6F1Q14863 301 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 ZNF169Q14929 603 aaPredicted RBP11.33□□□□□ -0.6
FDPS-215ENST00000490140 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
FDPS-215ENST00000490140 TMED2Q15363 201 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms