RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HS3ST3B1Q9Y662 390 aa13.43□□□□□ -0.26
VARS-227ENST00000489979 IGLV3-16A0A075B6K0 115 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 CRTAMO95727 393 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 MBD3O95983 291 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 MC4RP32245 332 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 ADRA1AP35348 466 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 ZNF140P52738 457 aaPredicted RBP13.42□□□□□ -0.26
VARS-227ENST00000489979 KCNK10P57789 538 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
VARS-227ENST00000489979 ART3Q13508 389 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 NKG7Q16617 165 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 FCRL6Q6DN72 434 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 RANBP10Q6VN20 620 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 LINC00696Q6ZRV3 163 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 TTLL10Q6ZVT0 673 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 FAM20CQ8IXL6 584 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 BCORP1Q8N888 145 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 CATSPER1Q8NEC5 780 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 DLG3Q92796 817 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 RELTQ969Z4 430 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 FKBP10Q96AY3 582 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.26
VARS-227ENST00000489979 SPSB2Q99619 263 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 GBA3Q9H227 469 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 C10orf88Q9H8K7 445 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 EURLQ9NYK6 297 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 OR6C2Q9NZP2 312 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 ASF1AQ9Y294 204 aa13.42□□□□□ -0.26
VARS-227ENST00000489979 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
VARS-227ENST00000489979 HACD1B0YJ81 288 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 ISM1B1AKI9 464 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 SPOPO43791 374 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 ANXA9O76027 345 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 PRSS56P0CW18 603 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 COMTP21964 271 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 ACRV1P26436 265 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 PEBP1P30086 187 aaKnown RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 SLC1A1P43005 524 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 GCGRP47871 477 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 SLC5A12Q1EHB4 618 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 TUBB8Q3ZCM7 444 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 COX15Q7KZN9 410 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 GDF7Q7Z4P5 450 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 SERPINA9Q86WD7 417 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 RHOT2Q8IXI1 618 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 ITLN2Q8WWU7 325 aaPredicted RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 THOC3Q96J01 351 aaKnown RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 LURAP1Q96LR2 239 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 SOX17Q9H6I2 414 aaPredicted RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 WDR54Q9H977 334 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 PLAGL1Q9UM63 463 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 KLHL20Q9Y2M5 609 aa13.41□□□□□ -0.26
VARS-227ENST00000489979 KLF2Q9Y5W3 355 aaPredicted RBP13.41□□□□□ -0.26
VARS-227ENST00000489979 CCDC168Q8NDH2 2452 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 PCNX1Q96RV3 2341 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 HIVEP1P15822 2718 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 A0A1B0GX78 115 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 AKR1B10O60218 316 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 KLHL18O94889 574 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 ONECUT2O95948 504 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 ALBP02768 609 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 SNRPB2P08579 225 aaKnown RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 ACADLP28330 430 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 RBL1P28749 1068 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 TDGF1P3P51864 188 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 ARSFP54793 590 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 Q0VFX4 171 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 MFAP5Q13361 173 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 BRD3Q15059 726 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 RBBP7Q16576 425 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 GPR33Q49SQ1 333 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 TAS2R42Q7RTR8 314 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 MCATQ8IVS2 390 aaKnown RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 TBC1D21Q8IYX1 336 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 LMF1Q96S06 567 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 CTSFQ9UBX1 484 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 POLG2Q9UHN1 485 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 SETD2Q9BYW2 2564 aaPredicted RBP13.4□□□□□ -0.26
VARS-227ENST00000489979 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
VARS-227ENST00000489979 DCHS2Q6V1P9 2916 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 hCG_1818297A0A087WSY0 165 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 TRBV5-4A0A0C4DH59 114 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 H7C0C1 242 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
VARS-227ENST00000489979 PCDH17O14917 1159 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms