RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF500O60304 480 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-206ENST00000489868 TSPAN1O60635 241 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 CDC123O75794 336 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-206ENST00000489868 HMBSP08397 361 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 NR2F1P10589 423 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 HSPA8P11142 646 aaKnown RBP4.58□□□□□ -1.68
CCDC39-206ENST00000489868 NNMTP40261 264 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 VEGFCP49767 419 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 KCNJ10P78508 379 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 SNAPC1Q16533 368 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 SLC25A53Q5H9E4 307 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 FBXL22Q6P050 247 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 SYT2Q8N9I0 419 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-206ENST00000489868 GMPPAQ96IJ6 420 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-206ENST00000489868 WNT5BQ9H1J7 359 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 ATP13A3Q9H7F0 1226 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 OLAHQ9NV23 265 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 ATAD3AQ9NVI7 634 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 HAO2Q9NYQ3 351 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 CACNG4Q9UBN1 327 aa4.58□□□□□ -1.68
CCDC39-206ENST00000489868 A0A087WW49 117 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 A0A1B0GU03 582 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 K7ENM7 598 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 SPRY1O43609 319 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-206ENST00000489868 STARD3NLO95772 234 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 IGHV4-31P0DP07 118 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 SLC9A3P48764 834 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 CLK1P49759 484 aaKnown RBP4.57□□□□□ -1.68
CCDC39-206ENST00000489868 PPARDQ03181 441 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 CA9Q16790 459 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 SYT14P1Q58G82 188 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 Q6ZSR9 355 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 RTN4RL2Q86UN3 420 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 DCLK2Q8N568 766 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 ZNF611Q8N823 705 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 TMEM178AQ8NBL3 297 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 SSMEM1Q8WWF3 244 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 TAF15Q92804 592 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC39-206ENST00000489868 DHX58Q96C10 678 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 ZNF653Q96CK0 615 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 ZNF599Q96NL3 588 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 PIGQQ9BRB3 760 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 SHARPINQ9H0F6 387 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 MYNNQ9NPC7 610 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 PLCXD1Q9NUJ7 323 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 CPSF2Q9P2I0 782 aaKnown RBP4.57□□□□□ -1.68
CCDC39-206ENST00000489868 PADI2Q9Y2J8 665 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 FAM169AQ9Y6X4 670 aa4.57□□□□□ -1.68
CCDC39-206ENST00000489868 PASKQ96RG2 1323 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 hCG_1809904A0A1W2PP81 198 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 A0A1W2PPE2 198 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 A0A1W2PR64 198 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 MSGN1A6NI15 193 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 ADRB2P07550 413 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 CEBPBP17676 345 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 CA6P23280 308 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 JAK1P23458 1154 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 MAGEA11P43364 429 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 SQLEQ14534 574 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
CCDC39-206ENST00000489868 ELFN2Q5R3F8 820 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 C16orf54Q6UWD8 224 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 EID3Q8N140 333 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 PHLDA1Q8WV24 401 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-206ENST00000489868 LINC00615Q96LM1 132 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-206ENST00000489868 RAD9AQ99638 391 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 APOL6Q9BWW8 343 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 EGLN1Q9GZT9 426 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 ERVMER34-1Q9H9K5 563 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 RNF186Q9NXI6 227 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 ANAPC2Q9UJX6 822 aa4.56□□□□□ -1.68
CCDC39-206ENST00000489868 FBXO2Q9UK22 296 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-206ENST00000489868 PPIEQ9UNP9 301 aaKnown RBP4.56□□□□□ -1.68
CCDC39-206ENST00000489868 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 TCERG1O14776 1098 aaKnown RBP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 KHDRBS3O75525 346 aaKnown RBP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 PSMD10O75832 226 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 DDHD2O94830 711 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 PFKFB1P16118 471 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 MATR3P43243 847 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 LIG4P49917 911 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 BMXP51813 675 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 IRX1P78414 480 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 GCNT1Q02742 428 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 TAF10Q12962 218 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 C6orf163Q5TEZ5 329 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 PSRC1Q6PGN9 363 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 FAM198BQ6UWH4 519 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 ARHGAP22Q7Z5H3 698 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 OR2T6Q8NHC8 308 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 HCAR2Q8TDS4 363 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 TEKT4Q8WW24 435 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 NUDT16L1Q9BRJ7 211 aaKnown RBP4.55□□□□□ -1.68
CCDC39-206ENST00000489868 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 CCDC106Q9BWC9 280 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 FGF21Q9NSA1 209 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 DPP3Q9NY33 737 aa4.55□□□□□ -1.68
CCDC39-206ENST00000489868 ABT1Q9ULW3 272 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms