RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 C4BPAP04003 597 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TP53P04637 393 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PSAPP07602 524 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ITGAMP11215 1152 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CD33P20138 364 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 EFNA1P20827 205 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CD72P21854 359 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ALAS2P22557 587 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TNFSF8P32971 234 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 HSD17B2P37059 387 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PIGAP37287 484 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MTHFRP42898 656 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 KCNC1P48547 511 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CDH6P55285 790 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ARPP19P56211 112 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 HUNKP57058 714 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MYL6P60660 151 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 C1QTNF8P60827 252 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 RAB14P61106 215 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CHRNB3Q05901 458 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 HYAL2Q12891 473 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IFRD2Q12894 506 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MRPL28Q13084 256 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 QPRTQ15274 297 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 HKDC1Q2TB90 917 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MTERF2Q49AM1 385 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 KLHL12Q53G59 568 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM209BQ5JX69 171 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 KDM4DQ6B0I6 523 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 GPR139Q6DWJ6 353 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CFAP77Q6ZQR2 320 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 LARP4Q71RC2 724 aaKnown RBP eCLIP4.67□□□□□ -1.662e-6■■■■■ 32.5
SNRNP40-206ENST00000489853 REC114Q7Z4M0 266 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 B3GNT8Q7Z7M8 397 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 P3H2Q8IVL5 708 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 GPD1LQ8N335 351 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 C9orf62Q8N4C0 152 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 WDTC1Q8N5D0 677 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 OR5T2Q8NGG2 359 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP2W1Q8TAV3 490 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 SYTL5Q8TDW5 730 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 UBASH3BQ8TF42 649 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 LPAR1Q92633 364 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 SGK3Q96BR1 496 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TUBGCP3Q96CW5 907 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MOCOSQ96EN8 888 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 P2RX7Q99572 595 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 C12orf57Q99622 126 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 CGRRF1Q99675 332 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MRPL57Q9BQC6 102 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 BEX2Q9BXY8 128 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PRRG3Q9BZD7 231 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 WDR11Q9BZH6 1224 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MMP28Q9H239 520 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IGFLR1Q9H665 355 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 LDAHQ9H6V9 325 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 IL1RL2Q9HB29 575 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 SPON1Q9HCB6 807 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PAK6Q9NQU5 681 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PRDM11Q9NQV5 511 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 EIF2B3Q9NR50 452 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM39AQ9NV64 488 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MBD2Q9UBB5 411 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 RAB23Q9ULC3 237 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 USP18Q9UMW8 372 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 COPS3Q9UNS2 423 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MINPP1Q9UNW1 487 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM5Q9Y2B1 443 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 POLR3KQ9Y2Y1 108 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 GMPPBQ9Y5P6 360 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 MAGED1Q9Y5V3 778 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 PTCH2Q9Y6C5 1203 aa4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 ZFC3H1O60293 1989 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-206ENST00000489853 TRAV6A0A075B6T7 132 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC35F4A4IF30 521 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM86C2PA6NEL3 165 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TUBAL3A6NHL2 446 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 WTIPA6NIX2 430 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 C2orf81A6NN90 581 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HACD1B0YJ81 288 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LINC01387J3KSC0 135 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ABCD4O14678 606 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 KPNA5O15131 536 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ATXN7O15265 892 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC16A4O15374 487 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 GATCO43716 136 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 MATN4O95460 622 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LDOC1O95751 146 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 FADS2O95864 444 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TGM6O95932 706 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 NPPAP01160 153 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 MT-ND1P03886 318 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RAF1P04049 648 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TPOP07202 933 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HOXD8P13378 290 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 NCK1P16333 377 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ZP3P21754 424 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms