RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MMGT1Q8N4V1 131 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SLC22A18Q96BI1 424 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 FCRL4Q96PJ5 515 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 LRRC1Q9BTT6 524 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 RAB11FIP5Q9BXF6 653 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SPRY4Q9C004 299 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 TWSG1Q9GZX9 223 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SAYSD1Q9NPB0 183 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 TAS2R13Q9NYV9 303 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 ZFATQ9P243 1243 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 CORO1CQ9ULV4 474 aaPredicted RBP16.79■□□□□ 0.28
MDC1-206ENST00000489540 BTRCQ9Y297 605 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 NFS1Q9Y697 457 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 ANKRD11Q6UB99 2663 aaPredicted RBP16.79■□□□□ 0.28
MDC1-206ENST00000489540 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 EIF3FO00303 357 aaPredicted RBP16.79■□□□□ 0.28
MDC1-206ENST00000489540 RASGRF2O14827 1237 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 MPC1LP0DKB6 136 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 FOLR1P15328 257 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 ATP1A2P50993 1020 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 TUBB4BP68371 445 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SLC7A5Q01650 507 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 GRB7Q14451 532 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 TGIF1Q15583 401 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 COL28A1Q2UY09 1125 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
MDC1-206ENST00000489540 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 PPP1R3BQ86XI6 285 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 CTAGE4Q8IX94 777 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 OR2L8Q8NGY9 312 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 OR8K5Q8NH50 307 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 GIMAP7Q8NHV1 300 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 FBXO25Q8TCJ0 367 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 PPM1MQ96MI6 270 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 OR2A14Q96R47 310 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 CCNL2Q96S94 520 aaPredicted RBP16.79■□□□□ 0.28
MDC1-206ENST00000489540 GPR21Q99679 349 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SLC30A3Q99726 388 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 MENTQ9BUN1 341 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SYTL2Q9HCH5 934 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 FAM114A2Q9NRY5 505 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 FGF21Q9NSA1 209 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 SOHLH2Q9NX45 425 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 LNPEPQ9UIQ6 1025 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 TRMT6Q9UJA5 497 aaKnown RBP16.79■□□□□ 0.28
MDC1-206ENST00000489540 PILRAQ9UKJ1 303 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 RARRES3Q9UL19 164 aa16.79■□□□□ 0.28
MDC1-206ENST00000489540 CACNA1BQ00975 2339 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 DMXL2Q8TDJ6 3036 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 ISM1B1AKI9 464 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 PSIP1O75475 530 aaKnown RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 KRT37O76014 449 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 GSTA2P09210 222 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 UGT2B7P16662 529 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 MAP4P27816 1152 aaKnown RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 TMPRSS3P57727 454 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 TUBB3Q13509 450 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 KCNAB1Q14722 419 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 TRADDQ15628 312 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 SLC5A12Q1EHB4 618 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 LRRC8EQ6NSJ5 796 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 CYS1Q717R9 158 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 SLC26A11Q86WA9 606 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 RASGRP3Q8IV61 690 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 CD200R1Q8TD46 325 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 SEC14L1Q92503 715 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 NDNQ99608 321 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 WDR70Q9NW82 654 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 NSMCE4AQ9NXX6 385 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 SPHK1Q9NYA1 384 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 RUVBL2Q9Y230 463 aaKnown RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 VWA7Q9Y334 891 aa16.78■□□□□ 0.28
MDC1-206ENST00000489540 TMEM184BQ9Y519 407 aaPredicted RBP16.78■□□□□ 0.28
MDC1-206ENST00000489540 SPAG6O75602 509 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 STK17BO94768 372 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 CATP04040 527 aaKnown RBP16.77■□□□□ 0.27
MDC1-206ENST00000489540 MSL3P1P0C860 447 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 EBLN1P0CF75 366 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 ST6GAL1P15907 406 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 BDKRB1P46663 353 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 RGS4P49798 205 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 ZDHHC24Q6UX98 284 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 CYHR1Q6ZMK1 362 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 NLGN4XQ8N0W4 816 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 NLGN4YQ8NFZ3 816 aaPredicted RBP16.77■□□□□ 0.27
MDC1-206ENST00000489540 OR9A1PQ8NGU1 263 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 ASB11Q8WXH4 323 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 NKD1Q969G9 470 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 TCTN2Q96GX1 697 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 ELMO2Q96JJ3 720 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 IL17FQ96PD4 163 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 ULBP3Q9BZM4 244 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 CHRNA10Q9GZZ6 450 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms