RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 VRK3Q8IV63 474 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TAB3Q8N5C8 712 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TMEM102Q8N9M5 508 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 SLC35B2Q8TB61 432 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 ZNF778Q96MU6 729 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TMEM121Q9BTD3 319 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 TSGA10Q9BZW7 698 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CHRNA10Q9GZZ6 450 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 ZBTB20Q9HC78 741 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-206ENST00000489451 GPR83Q9NYM4 423 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 SERTAD3Q9UJW9 196 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 CDYLQ9Y232 598 aa11.34□□□□□ -0.59
ACTN4-206ENST00000489451 MIF4GDA9UHW6 222 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 LIN7AO14910 233 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 OR1I1O60431 355 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 DPM1O60762 260 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ZNF189O75820 626 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 STK10O94804 968 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 MSNP26038 577 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 COL8A1P27658 744 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 OTX2P32243 289 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 GRIA1P42261 906 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 GRB7Q14451 532 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 SEMA3AQ14563 771 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ITIH4Q14624 930 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 PLEKHN1Q494U1 663 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 CRB2Q5IJ48 1285 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ZNF534Q76KX8 674 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 TMEM139Q8IV31 216 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 TBC1D21Q8IYX1 336 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 RNF10Q8N5U6 811 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 LINC01555Q8NAE3 123 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 OR52K1Q8NGK4 314 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 OR5K2Q8NHB8 316 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 UBE2Q2Q8WVN8 375 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 PNPLA2Q96AD5 504 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 SNRNP40Q96DI7 357 aaKnown RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 TCTN2Q96GX1 697 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 RANBP9Q96S59 729 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ZNF552Q9H707 407 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-206ENST00000489451 LRRC40Q9H9A6 602 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 SLC2A6Q9UGQ3 507 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 ASF1AQ9Y294 204 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 CELSR2Q9HCU4 2923 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 FBN3Q75N90 2809 aa11.33□□□□□ -0.6
ACTN4-206ENST00000489451 A0A0J9YY10 115 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 ZSCAN9O15535 394 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-206ENST00000489451 OR2B3O76000 313 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 GSTM1P09488 218 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 PKLRP30613 574 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 SHMT2P34897 504 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 NSG1P42857 185 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 GSTM4Q03013 218 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 VWA5B1Q5TIE3 1220 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 MLIPQ5VWP3 458 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 ARHGEF18Q6ZSZ5 1173 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 ATG4AQ8WYN0 398 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 ELMO1Q92556 727 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 DESI2Q9BSY9 194 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 DHRS4Q9BTZ2 278 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 VPS37BQ9H9H4 285 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 CIDEBQ9UHD4 219 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 ERRFI1Q9UJM3 462 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-206ENST00000489451 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 PTRH2Q9Y3E5 179 aaKnown RBP11.32□□□□□ -0.6
ACTN4-206ENST00000489451 CSAG2Q9Y5P2 127 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 SETD2Q9BYW2 2564 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-206ENST00000489451 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-206ENST00000489451 F8P00451 2351 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 OTOGQ6ZRI0 2925 aa11.32□□□□□ -0.6
ACTN4-206ENST00000489451 MDC1Q14676 2089 aaKnown RBP11.31□□□□□ -0.6
ACTN4-206ENST00000489451 WIPF3A6NGB9 483 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 IQCF5A8MTL0 148 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 C9J4A7 227 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 ALOX12BO75342 701 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 CLDN1O95832 211 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 FTCDO95954 541 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
ACTN4-206ENST00000489451 MAGP20916 626 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 AGXTP21549 392 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 CCR7P32248 378 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 RRADP55042 308 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 ACVR1Q04771 509 aa11.31□□□□□ -0.6
ACTN4-206ENST00000489451 SSPNQ14714 243 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms