RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CSTF2P33240 577 aaKnown RBP eCLIP15.26■□□□□ 0.03
C9orf3-219ENST00000488186 HSD17B3P37058 310 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 HSD17B2P37059 387 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ARL4DP49703 201 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 SERPINB8P50452 374 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CFHR1Q03591 330 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 IFFO1Q0D2I5 559 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 SP140Q13342 867 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 TRA2AQ13595 282 aaKnown RBP eCLIP15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CACHD1Q5VU97 1274 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 FOXR1Q6PIV2 292 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 FAM92BQ6ZTR7 304 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 SPNS2Q8IVW8 549 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CNPY4Q8N129 248 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CAVIN3Q969G5 261 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 PDLIM5Q96HC4 596 aaKnown RBP15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CCDC74BQ96LY2 380 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 PARVBQ9HBI1 364 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 OGFRQ9NZT2 677 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 SPATA7Q9P0W8 599 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CTNNAL1Q9UBT7 734 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 EPHA6Q9UF33 1036 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ICKQ9UPZ9 632 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ACOT9Q9Y305 439 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ENTPD2Q9Y5L3 495 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 COL27A1Q8IZC6 1860 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 IGHV5-10-1A0A0J9YXX1 117 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 IQANK1A0A1B0GTG1 560 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 AGRPO00253 132 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 BTN3A1O00481 513 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 TOP3BO95985 862 aaKnown RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 SNRPAP09012 282 aaKnown RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 SPINK2P20155 84 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 CSF2RBP32927 897 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 GFERP55789 205 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 TSTA3Q13630 321 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 CCSMST1Q4G0I0 132 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 TMEM207Q6UWW9 146 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 ZNF574Q6ZN55 896 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 FRA10AC1Q70Z53 315 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 CCDC91Q7Z6B0 441 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 C2orf73Q8N5S3 287 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 DCAKDQ8WVC6 231 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 SLC22A18Q96BI1 424 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 IL17FQ96PD4 163 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 CMKLR1Q99788 373 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 SLC12A9Q9BXP2 914 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 RAB33BQ9H082 229 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 VPS11Q9H270 941 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 PPCSQ9HAB8 311 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 TMEM9Q9P0T7 183 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 PSMC3IPQ9P2W1 217 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-219ENST00000488186 KLK13Q9UKR3 277 aa15.25■□□□□ 0.03
C9orf3-219ENST00000488186 A0A087X1B8 175 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 TRIM49D1C9J1S8 452 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 BTN3A3O00478 584 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 TSPAN12O95859 305 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CHRM5P08912 532 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CDH3P22223 829 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 PKLRP30613 574 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CCKBRP32239 447 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 SEPHS1P49903 392 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ATP6V0D1P61421 351 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ZFP36L1Q07352 338 aaKnown RBP15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CSHL1Q14406 222 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ZKSCAN8Q15776 578 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ANKS6Q68DC2 871 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 FBXO38Q6PIJ6 1188 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ADGRD1Q6QNK2 874 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 TMPRSS9Q7Z410 1059 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 TAX1BP1Q86VP1 789 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 MARCH9Q86YJ5 346 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 SLITRK4Q8IW52 837 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 SYTL1Q8IYJ3 562 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ADGRF3Q8IZF5 1079 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 SPATA6LQ8N4H0 392 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 FBXO15Q8NCQ5 510 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-219ENST00000488186 RCBTB1Q8NDN9 531 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 OR2L8Q8NGY9 312 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ANKRD49Q8WVL7 239 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ANKRD7Q92527 254 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 MTBPQ96DY7 904 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CCDC138Q96M89 665 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 TSNARE1Q96NA8 513 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CD180Q99467 661 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 PKP4Q99569 1192 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 NRTNQ99748 197 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 DERL2Q9GZP9 239 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 EPB41L4BQ9H329 900 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 SNX15Q9NRS6 342 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ACTR10Q9NZ32 417 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-219ENST00000488186 DKK4Q9UBT3 224 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 FETUBQ9UGM5 382 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 ADAMTS6Q9UKP5 1117 aa15.24■□□□□ 0.03
C9orf3-219ENST00000488186 MN1Q10571 1320 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 CCDC187A0A096LP49 1063 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms